|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR12
(D)
,
OCR12-8
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yjbF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yjbF
Search strains by all related name:
yjbF b4027 ECK4019 JW5711 o222
|
General information (Go to Linear View: )
|
|
Gene Name
|
yjbF
|
|
Alternative name
|
b4027,ECK4019,JW5711,o222
|
|
Location, Length
|
4,234,285 - 4,234,923
(
+
)
;
91.26
min
;
639
(bp) ,
212
(aa)
|
|
Product
|
putative lipoprotein
|
|
Operon Name
|
yjbEFGH
|
|
Note
|
GO_component: GO:0009274 - peptidoglycan-based cell wall
|
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Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yjbF )
GO:0016020
;
membrane ( yjbF )
|
|
PID
|
87082360
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YJBF_ECOLI
(
P32687
)
|
|
- Protein name
|
Hypothetical lipoprotein yjbF precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yjbF; OrderedLocusNames=b4027;
|
| Sequences |
Amino acid
FASTA format
|
0001 MKRPALILIC LLLQACSATT KELGNSLWDS LFGTPGVQLT DDDIQNMPYA SQYMQLNGGP QLFVVLAFAE
0071 DGQQKWVTQD QATLVTQHGR LVKTLLGGDN LIEVNNLAAD PLIKPAQIVD GASWTRTMGW TEYQQVRYAT
0141 ARSVFKWDGT DTVKVGSDET PVRVLDEEVS TDQARWHNRY WIDSEGQIRQ SEQYLGADYF PVKTTLIKAA
0211 KQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCCAAAATAA TTCGAGTCAT TGCATCTGTG
-070 GCTAGAAGTA TGAAGGGATT AACCATAACC ACACTCCGGT GTGGTTATTC TGCCCCTCTG GAGAAGAGTC
0001 gtgaagcgac ctgcactcat tcttatctgc ctgttattac aggcctgttc agccacgact aaagagctgg
0071 gcaattcact gtgggacagt ctgttcggca cgccaggcgt acagctgacg gatgatgata ttcaaaatat
0141 gccctacgcc agccagtaca tgcagcttaa tggcgggccg cagttatttg tggtgctggc cttcgctgaa
0211 gacggacaac aaaaatgggt cactcaggat caggctactc tcgttaccca acatggccgt ctggtgaaga
0281 ctctgctcgg cggcgacaac ctgattgaag tgaataacct tgctgccgac ccgctgatta aacccgcaca
0351 aatcgttgat ggcgcaagct ggacgcgcac gatgggctgg accgagtacc agcaggtacg ctacgccacc
0421 gcacgctcag tcttcaaatg ggatggcacc gataccgtca aagtcggcag cgatgaaacc ccggttcgcg
0491 tgctggacga agaagtctcc accgaccagg cgcgctggca taaccgctat tggatcgaca gcgaagggca
0561 aattcgccag tcggaacagt atctcggcgc ggattatttt ccggtgaaaa ccactctcat caaggcggca
0631 aaacaatgaT TAAACAAACT ATTGTCGCGT TGCTTTTGAG TGTGGGAGCG TCATCGGTCT TCGCGGCAGG
0701 AACCGTCAAG GTGTTCAGCA ATGGCAGCAG TGAGGCCAA
|
