|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL58
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
hyfG
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
hyfG
Search strains by all related name:
hyfG b2487 ECK2483 JW2472 o555
|
General information (Go to Linear View: )
|
|
Gene Name
|
hyfG
|
|
Alternative name
|
b2487,ECK2483,JW2472,o555
|
|
Location, Length
|
2,606,509 - 2,608,176
(
+
)
;
56.18
min
;
1668
(bp) ,
555
(aa)
|
|
Product
|
hydrogenase 4, subunit
|
|
Operon Name
|
hyfABCDEFGHIJR-focB
|
|
Note
|
hydrogenase 4 subunit; GO_process: GO:0009061 - anaerobic respiration
|
|
Function
|
enzyme; Energy metabolism, carbon: Anaerobic respiration
|
|
Gene Ontology
|
GO:0005506
;
iron ion binding ( hyfG )
GO:0005515
;
protein binding ( hyfG )
GO:0006118
;
electron transport ( hyfG )
GO:0006120
;
mitochondrial electron transport, NADH to ubiquinone ( hyfG )
GO:0008137
;
NADH dehydrogenase (ubiquinone) activity ( hyfG )
GO:0008901
;
ferredoxin hydrogenase activity ( hyfG )
GO:0009055
;
electron carrier activity ( hyfG )
GO:0016151
;
nickel ion binding ( hyfG )
GO:0016491
;
oxidoreductase activity ( hyfG )
GO:0016651
;
oxidoreductase activity, acting on NADH or NADPH ( hyfG )
GO:0046872
;
metal ion binding ( hyfG )
GO:0051287
;
NAD binding ( hyfG )
GO:0051536
;
iron-sulfur cluster binding ( hyfG )
GO:0051539
;
4 iron, 4 sulfur cluster binding ( hyfG )
|
|
PID
|
1788832
|
EC number
(KEGG Pathway)
|
1.-.-.-
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
HYCE_ECOLI
(
P16431
)
|
|
- Protein name
|
Formate hydrogenlyase subunit 5 precursor
|
|
- Synonyms
|
FHL subunit 5, Hydrogenase-3 component E
|
|
- Gene name
|
Name=hycE; Synonyms=hevE; OrderedLocusNames=b2721;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
hyfG
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain 4, Crystal Structure Of The Hydrophilic Domain Of Respiratory Complex I From Thermus Thermophilus
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hydrogenase-4 component G
|
|
PSI-BLAST
|
Hydrogenase-4 component G
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hydrogenase 4, subunit [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
COMPLEX1_49K
|
| Sequences |
Amino acid
FASTA format
|
0001 MNVNSSSNRG EAILAALKTQ FPGAVLDEER QTPEQVTITV KINLLPDVVQ YLYYQHDGWL PVLFGNDERT
0071 LNGHYAVYYA LSMEGAEKCW IVVKALVDAD SREFPSVTPR VPAAVWGERE IRDMYGLIPV GLPDQRRLVL
0141 PDDWPEDMHP LRKDAMDYRL RPEPTTDSET YPFINEGNSD ARVIPVGPLH ITSDEPGHFR LFVDGEQIVD
0211 ADYRLFYVHR GMEKLAETRM GYNEVTFLSD RVCGICGFAH SVAYTNSVEN ALGIEVPQRA HTIRSILLEV
0281 ERLHSHLLNL GLSCHFVGFD TGFMQFFRVR EKSMTMAELL IGSRKTYGLN LIGGVRRDIL KEQRLQTLKL
0351 VREMRADVSE LVEMLLATPN MEQRTQGIGI LDRQIARDLR FDHPYADYGN IPKTLFTFTG GDVFSRVMVR
0421 VKETFDSLAM LEFALDNMPD TPLLTEGFSY KPHAFALGFV EAPRGEDVHW SMLGDNQKLF RWRCRAATYA
0491 NWPVLRYMLR GNTVSDAPLI IGSLDPCYSC TDRVTLVDVR KRQSKTVPYK EIERYGIDRN RSPLK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCCACTATAG TCCTCTCAGG GACGCACGAT
-070 CTGCCTGCAC AACGTAGCAC CTGGCATGAT TTTTTGCCTT CAGGCACCGC ATCTGTTTCG GAGAAACACA
0001 gtgaacgtta attcatcgtc aaatcgtggc gaagcgattc tcgccgccct gaaaacgcag ttccccggcg
0071 cggtgctgga tgaagagcga caaacgcctg aacaggtcac cattacggtg aaaatcaatc tgctgcctga
0141 cgttgtacag tatctttatt atcaacatga tggctggctt ccggtcctgt ttggcaacga cgagcggaca
0211 cttaacggtc attacgcggt ttattatgcc ctttcaatgg aaggggccga aaaatgctgg attgtggtga
0281 aggcgctggt cgatgccgac agtcgggagt ttccgtcagt cacaccgcgc gtccctgccg cggtctgggg
0351 cgagcgagaa attcgcgata tgtacgggct gattccggtt ggcctgccgg atcagcgtcg cctggtgttg
0421 cccgatgact ggccggaaga tatgcatccg ctgcgcaaag atgcgatgga ttatcgactg cgccctgaac
0491 cgacgactga ttccgaaacg tatccgttta tcaatgaggg caacagcgat gcgcgggtga tccctgtcgg
0561 cccgctgcat atcacctccg atgaaccggg tcacttccgc ttgtttgtgg atggcgagca aattgtcgat
0631 gctgattacc gcctgtttta tgtccatcgc ggcatggaga aactggcaga aacgcggatg ggctacaacg
0701 aagtgacctt cttatcggac cgcgtgtgtg ggatttgcgg ttttgcccac agtgtggcct ataccaattc
0771 ggttgaaaat gcactgggga ttgaggtgcc gcaacgagca catactattc gctcgattct gctggaagtc
0841 gaacggctac acagtcattt gcttaacctt ggcctctcct gccatttcgt tggttttgat accggcttta
0911 tgcaattttt ccgcgtgcgg gaaaagtcga tgacgatggc ggaattgctg atcgggtcgc gtaaaaccta
0981 cggtctgaat ctgattggtg gtgttcgccg cgatattctc aaagagcaac gtctgcaaac gctgaaactg
1051 gtgcgcgaga tgcgcgccga cgtgtcggag ctggtagaga tgctgcttgc tacgccgaat atggaacaac
1121 gcactcaggg cattggcatt ctcgaccgac aaatcgcccg tgatttgcgc tttgatcacc cctacgccga
1191 ctacggcaat attccaaaaa cactgtttac ctttaccggc ggcgatgttt tctcccgcgt gatggtccgt
1261 gtcaaagaga cgtttgattc gctggcaatg ctggaatttg ccctcgacaa catgccggat accccactgc
1331 tgaccgaagg ctttagctat aaacctcacg cattcgcgct gggctttgtt gaagcgccac gcggtgaaga
1401 cgtgcactgg agcatgctcg gtgataacca aaaattgttc cgctggcgct gccgtgccgc cacctacgcc
1471 aactggccgg tgttgcgtta catgctgcgc ggcaataccg tttctgacgc accgctgatt atcggtagcc
1541 ttgatccctg ctactcctgt accgaccgtg tgacgctggt agatgtgcgc aagcgccagt caaaaaccgt
1611 gccgtataaa gagatcgaac gctacggcat tgatcgtaac cgttcgccgc tgaagtaaGG ACAGAAGATG
1681 CTGAAGTTAC TGAAAACTAT TATGCGCGCC GGAACCGCGA CGGTGAAATA TCCCTTCGCG CCACTGGAGG
1751 TCAGCCCTGG CTTTCGCG
|
