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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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J Basic Microbiol. 1995;35(4):217-27.
The fix Escherichia coli region contains four genes related to carnitine metabolism.
Eichler K, Buchet A, Bourgis F, Kleber HP, Mandrand-Berthelot MA.
(
7473063
)
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Deletion
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OCR28
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
fixB
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Related strains
|
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Strains Search
|
Search strains by gene name:
fixB
Search strains by all related name:
fixB b0042 ECK0043 JW0041 yaaR
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General information (Go to Linear View: )
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Gene Name
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fixB
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Alternative name
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b0042,ECK0043,JW0041,yaaR
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Location, Length
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43,188 - 44,129
(
+
)
;
0.93
min
;
942
(bp) ,
313
(aa)
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Product
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putative electron transfer flavoprotein,NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein
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Operon Name
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fixABCX
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Note
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probable flavoprotein subunit, carnitine metabolism; GO_process: GO:0016052 - carbohydrate catabolic process
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Function
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putative enzyme; Energy metabolism, carbon: Electron transport
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Gene Ontology
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GO:0006118
;
electron transport ( fixB )
GO:0006810
;
transport ( fixB )
GO:0009055
;
electron carrier activity ( fixB )
GO:0009437
;
carnitine metabolic process ( fixB )
GO:0050660
;
FAD binding ( fixB )
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PID
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1786226
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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FIXB_ECOLI
(
P31574
)
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- Protein name
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FixB protein.
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- Synonyms
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- Gene name
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Name=fixB; OrderedLocusNames=b0042;
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MMBR References
|
J Basic Microbiol. 1995;35(4):217-27.
The fix Escherichia coli region contains four genes related to carnitine metabolism.
Eichler K, Buchet A, Bourgis F, Kleber HP, Mandrand-Berthelot MA.
(
7473063
)
|
J Bacteriol. 1998;180:2599-2608
Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region.
Buchet, A., K. Eichler, and M. A. Mandrand-Berthelot.
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| Sequences |
Amino acid
FASTA format
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0001 MNTFSQVWVF SDTPSRLPEL MNGAQALANQ INTFVLNDAD GAQAIQLGAN HVWKLNGKPD DRMIEDYAGV
0071 MADTIRQHGA DGLVLLPNTR RGKLLAAKLG YRLKAAVSND ASTVSVQDGK ATVKHMVYGG LAIGEERIAT
0141 PYAVLTISSG TFDAAQPDAS RTGETHTVEW QAPAVAITRT ATQARQSNSV DLDKARLVVS VGRGIGSKEN
0211 IALAEQLCKA IGAELACSRP VAENEKWMEH ERYVGISNLM LKPELYLAVG ISGQIQHMVG ANASQTIFAI
0281 NKDKNAPIFQ YADYGIVGDA VKILPALTAA LAR
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGCGCGAACG TCAGCGCATC GTGATTGAAG
-070 GCGACGGCGA AGAACAGATC GCCGCATTTG CTGAAAATCT TCGCAAAGTC ATTTAATTAC AGGGGATGCT
0001 atgaacacgt tttctcaagt ctgggtattc agcgataccc cttctcgtct gccggaactg atgaacggtg
0071 cgcaggcttt agctaatcaa atcaacacct ttgtcctcaa tgatgccgac ggcgcacagg caatccagct
0141 cggcgctaat catgtctgga aattaaacgg caaaccggac gatcggatga tcgaagatta cgccggtgtc
0211 atggctgaca ctattcgcca gcacggcgca gacggcctgg tgctgctgcc aaacacccgt cgcggcaaat
0281 tactggcggc aaaactgggt tatcgcctta aagcggcggt gtctaacgat gccagcaccg tcagcgtaca
0351 ggacggtaaa gcgacagtga aacacatggt ttacggtggt ctggcgattg gcgaagaacg cattgccacg
0421 ccgtatgcgg tactgaccat cagcagcggc acgttcgatg cggctcagcc agacgcgtca cgcactggcg
0491 aaacgcacac cgtggagtgg caggctccgg ctgtggcgat tacccgcacg gcaacccagg cgcgccagag
0561 caacagcgtc gatctcgaca aagcccgtct ggtggtcagc gtcggtcgcg gtattggcag caaagagaac
0631 attgcgctgg cagaacagct ttgcaaggcg ataggtgcgg agttggcctg ttctcgtccg gtggcggaaa
0701 acgaaaaatg gatggagcac gaacgctatg tcggtatctc caacctgatg ctgaaacctg aactgtacct
0771 ggcggtgggg atctccgggc agatccagca catggttggc gctaacgcgt cgcaaaccat tttcgccatc
0841 aataaagata aaaatgcgcc gatcttccag tacgcggatt acggcattgt tggcgacgcc gtgaagatcc
0911 ttccggcgct gaccgcagct ttagcgcgtt gaTCCACTCT GGCAGGGCTG CATTTTGGCC CTGCCGCTGA
0981 CAGGGAGCTC TTATGTCCGA AGATATCTTT GACGCCATCA TCGTCGGTGC AGGGCTTGCC GG
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