|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
17
(LD)
,
OCR57,60-3 (LD 17C_CRS)
(D)
,
OCR57,60-4 (LD 17C_P/O)
(D)
,
OCR58
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cbpM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cbpM
Search strains by all related name:
cbpM b0999 ECK0990 JW0984 yccD
|
General information (Go to Linear View: )
|
|
Gene Name
|
cbpM
|
|
Alternative name
|
b0999,ECK0990,JW0984,yccD
|
|
Location, Length
|
1,061,773 - 1,062,078
(
-
)
;
22.88
min
;
306
(bp) ,
101
(aa)
|
|
Product
|
modulator of CbpA co-chaperone
|
|
Operon Name
|
cbpAM
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0030188
;
chaperone regulator activity ( cbpM )
|
|
PID
|
1787234
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YCCD_ECOLI
(
P36660
)
|
|
- Protein name
|
Hypothetical protein yccD.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yccD; OrderedLocusNames=b0999, z1417, ECs1154, SF1003, S1072;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
cbpM
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Chaperone-modulator protein cbpM
|
|
PSI-BLAST
|
Chaperone-modulator protein cbpM
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein SboyB_01004167 [Shigella boydii BS512]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MANVTVTFTI TEFCLHTGIS EEELNEIVGL GVVEPREIQE TTWVFDDHAA IVVQRAVRLR HELALDWPGI
0071 AVALTLMDDI AHLKQENRLL RQRLSRFVAH P
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgatgccgcc gaaaccggat gaaaacactg
-070 ccgcgctgtg gcagcaactg gcagacgccc agtcgtcttt tgatccacgt aaagattggg ggaaagcata
0001 atggctaatg ttacggtgac ttttactatt accgaatttt gcctgcatac cggcatctct gaagaggagt
0071 tgaatgaaat tgtcggtttg ggggtggttg aaccgcgtga gatccaggaa acaacctggg tatttgacga
0141 ccatgccgcc attgtggtgc aacgcgcggt acgcctgcgt catgaactgg ctctggactg gccggggatc
0211 gcggtggcgc tgacgttaat ggatgatatt gcgcacctga agcaggaaaa ccgcctgctg cgccagcggc
0281 tttcccggtt tgtagctcat ccgtgatgtg tgtttgccgg atgcgatgac gcatcttaac cggtctacaa
0351 agattacagt tcctgtgggc cggataagac gttcacgccg catccggcaa ctgcgc
|
