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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Deletion
|
OCR03
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
hemY
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
hemY
Search strains by all related name:
hemY b3802 ECK3796 JW3774
|
General information (Go to Linear View: )
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Gene Name
|
hemY
|
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Alternative name
|
b3802,ECK3796,JW3774
|
|
Location, Length
|
3,984,709 - 3,985,905
(
-
)
;
85.88
min
;
1197
(bp) ,
398
(aa)
|
|
Product
|
putative protoheme IX synthesis protein
|
|
Operon Name
|
hemCDXY
|
|
Note
|
a late step of protoheme IX synthesis
|
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Function
|
enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin
|
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Gene Ontology
|
GO:0005488
;
binding ( hemY )
GO:0005886
;
plasma membrane ( hemY )
GO:0006779
;
porphyrin biosynthetic process ( hemY )
GO:0016020
;
membrane ( hemY )
GO:0016021
;
integral to membrane ( hemY )
|
|
PID
|
1790234
|
EC number
(KEGG Pathway)
|
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
HEMY_ECOLI
(
P09128
)
|
|
- Protein name
|
HemY protein.
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- Synonyms
|
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- Gene name
|
OrderedLocusNames=b3802, c4721, z5316, ECs4732, SF3874, S3882;
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Homology Analysis
|
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BLAST
|
|
Bacteria
|
|
GTOP
|
hemY
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein hemY
|
|
PSI-BLAST
|
Protein hemY
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
a late step of protoheme IX synthesis [Escherichia coli O157:H7 EDL933]
|
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Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
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PROSITE
|
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PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
RGD
MITOCH_CARRIER
|
|
MMBR References
|
Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR.
(
1379743
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MLKVLLLFVL LIAGIVVGPM IAGHQGYVLI QTDNYNIETS VTGLAIILIL AMVVLFAIEW LLRRIFRTGA
0071 HTRGWFVGRK RRRARKQTEQ ALLKLAEGDY QQVEKLMAKN ADHAEQPVVN YLLAAEAAQQ RGDEARANQH
0141 LERAAELAGN DTIPVEITRV RLQLARNENH AARHGVDKLL EVTPRHPEVL RLAEQAYIRT GAWSSLLDII
0211 PSMAKAHVGD EEHRAMLEQQ AWIGLMDQAR ADNGSEGLRN WWKNQSRKTR HQVALQVAMA EHLIECDDHD
0281 TAQQIIIDGL KRQYDDRLLL PIPRLKTNNP EQLEKVLRQQ IKNVGDRPLL WSTLGQSLMK HGEWQEASLA
0351 FRAALKQRPD AYDYAWLADA LDRLHKPEEA AAMRRDGLML TLQNNPPQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gtaacctgct ggcacaaccg gcagcgggga
-070 caacggaagc taaacctgca cctgcaccgc aagctgatac tccggcagcc gcgccgcaag gagaataacc
0001 atgctaaaag tgttattgct ctttgtgttg ctgattgcgg ggatcgtggt tggcccgatg attgccggcc
0071 atcagggtta tgtgctgatc cagaccgaca actacaatat cgaaaccagc gtcacgggcc tggcgatcat
0141 attgattctg gcgatggtag tgctgtttgc cattgagtgg ctactgcggc ggatcttccg cactggcgcg
0211 cacacccgtg ggtggtttgt cggacgtaag cgtcgccgtg cacgtaagca gaccgaacag gcgctgctga
0281 aactggcgga aggcgattat cagcaagttg aaaagctgat ggcgaaaaat gccgatcacg cggaacaacc
0351 ggtggtgaac tatctactgg ctgccgaagc cgcgcaacaa cgtggtgatg aagcacgcgc caaccaacat
0421 ctggaacgcg cagcggagct ggccggcaac gacaccattc cggtagaaat cacccgcgta cgtctgcaac
0491 tggcccgtaa tgaaaaccat gctgcacgcc acggcgtgga taagctgctg gaagttacgc cacgccatcc
0561 ggaagtatta cgtctggcgg aacaggcgta tatccgcaca ggtgcatgga gttcgctgct ggatattatc
0631 ccatcaatgg cgaaagccca tgttggtgat gaagaacatc gtgcaatgct ggaacaacag gcatggattg
0701 gcctgatgga tcaggcgcgt gccgataacg gtagcgaagg tttgcgtaac tggtggaaaa accaaagccg
0771 gaaaacgcgt catcaggtag cgttgcaggt ggcaatggcg gaacatctta ttgaatgtga cgatcatgat
0841 actgcccagc aaattatcat cgatggcctg aaacgccagt acgacgatcg cctactgctg ccgattcctc
0911 gactgaaaac aaacaatccg gaacagctgg aaaaagtgct gcgccagcaa atcaaaaacg tcggcgatcg
0981 cccgctgttg tggagcacac tgggccagtc actgatgaag cacggagaat ggcaggaagc atcgctcgcc
1051 ttccgcgcag cgctgaaaca acgtccggac gcctacgatt acgcatggct tgccgacgcg ctggacagac
1121 tgcacaagcc ggaagaagct gcagctatgc gtcgcgacgg tttgatgtta acgttgcaga ataacccgcc
1191 acagtagttc cttctcaccc ggaggcaagc acctccgggg ccttcctgat acataaaaaa acgcctgctc
1261 ttattacgga gcaggcgtta aaacaggtct gtatgac
|
