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PEC Original Annotations
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Essentiality
|
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Class
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non-essential
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|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCR28
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
caiE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
caiE
Search strains by all related name:
caiE b0035 ECK0036 JW5004
|
General information (Go to Linear View: )
|
|
Gene Name
|
caiE
|
|
Alternative name
|
b0035,ECK0036,JW5004
|
|
Location, Length
|
34,781 - 35,371
(
-
)
;
0.75
min
;
591
(bp) ,
196
(aa)
|
|
Product
|
stimulator of CaiD and CaiB enzyme activities
|
|
Operon Name
|
caiTABCDE
|
|
Note
|
possible synthesis of cofactor for carnitine racemase and dehydratase; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0042413 - carnitine catabolic process
|
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Function
|
putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions
|
|
Gene Ontology
|
GO:0008415
;
acyltransferase activity ( caiE )
GO:0016740
;
transferase activity ( caiE )
|
|
PID
|
87081681
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
CAIE_ECOLI
(
P39206
)
|
|
- Protein name
|
Carnitine operon protein caiE.
|
|
- Synonyms
|
|
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- Gene name
|
Name=caiE; OrderedLocusNames=b0035;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
caiE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Structure Of Ferripyochelin Binding Protein From Pyrococcus Horikoshii Ot3
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Carnitine operon protein caiE
|
|
PSI-BLAST
|
Carnitine operon protein caiE
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted acyl transferase [Escherichia coli W3110]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
RGD
|
|
MMBR References
|
Mol Microbiol. 1994;13(5):775-86.
Molecular characterization of the cai operon necessary for carnitine metabolism in Escherichia coli.
Eichler K, Bourgis F, Buchet A, Kleber HP, Mandrand-Berthelot MA.
(
7815937
)
|
J Bacteriol. 1998;180:2599-2608
Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region.
Buchet, A., K. Eichler, and M. A. Mandrand-Berthelot.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSYYAFEGLI PVVHPTAFVH PSAVLIGDVI VGAGVYIGPL ASLRGDYGRL IVQAGANIQD GCIMHGYCDT
0071 DTIVGENGHI GHGAILHGCL IGRDALVGMN SVIMDGAVIG EESIVAAMSF VKAGFRGEKR QLLMGTPARA
0141 VRNVSDDELH WKRLNTKEYQ DLVGRCHVSL HETQPLRQME ENRPRLQGTT DVTPKR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgaaacacta tccatcggtt ctgcattcgg
-070 aagatgccat tgaagggccg ctggcgtttg ccgagaagcg cgatccggtg tggaaaggac gttaacaacc
0001 gtgagctatt acgcctttga ggggttaatt ccggtggttc acccgacggc gtttgtccat cccagtgccg
0071 tcttgattgg cgatgtgatt gtgggagccg gtgtctacat cggcccactc gcctcactgc gtggtgacta
0141 cgggcggttg atcgtgcaag cgggagccaa tattcaggat ggctgcatta tgcatggcta ctgcgacact
0211 gacactatcg ttggggaaaa cggccatatc gggcacggag cgatcctgca tggttgtttg attggtcgcg
0281 atgcattggt cgggatgaac agcgtgatta tggatggcgc ggtcattggc gaagagagca ttgttgccgc
0351 catgagcttt gtcaaagcgg gctttcgcgg cgagaaacgc cagttgttga tgggtacgcc agcccgcgct
0421 gtacgcaatg ttagtgacga cgagttacac tggaaacggt tgaataccaa agagtatcag gatcttgtcg
0491 ggcgctgtca tgtatcgtta catgaaacgc agccactgag gcaaatggag gaaaatcgcc cccgtttgca
0561 ggggacgacg gatgtgacgc ctaaacggtg atcttgccgg atgcgacctg gttgctggat aagatgctac
0631 aacatcgcat ctggcaagca ggacgcccgg tatcaacgag ataaaattaa cgacgcatac t
|
