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PEC Original Annotations
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Essentiality
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Class
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non-essential
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|
References (PMID)
|
J Bacteriol. 1998;180(11):2915-23.
Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.
Diaz E, Ferrandez A, Garcia JL.
(
9603882
)
|
|
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Deletion
|
OCL55
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
hcaT
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
hcaT
Search strains by all related name:
hcaT b2536 ECK2533 f379 JW2520 o768 yfhS
|
General information (Go to Linear View: )
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|
Gene Name
|
hcaT
|
|
Alternative name
|
b2536,ECK2533,f379,JW2520,o768,yfhS
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|
Location, Length
|
2,664,729 - 2,665,868
(
-
)
;
57.43
min
;
1140
(bp) ,
379
(aa)
|
|
Product
|
putative 3-phenylpropionic transporter
|
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Operon Name
|
hcaT
|
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Note
|
MFS (major facilitator superfamily) transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
|
transport; Degradation of small molecules: Carbon compounds
|
|
Gene Ontology
|
GO:0005403
;
hydrogen:sugar symporter activity ( hcaT )
GO:0005886
;
plasma membrane ( hcaT )
GO:0006810
;
transport ( hcaT )
GO:0015293
;
symporter activity ( hcaT )
GO:0016020
;
membrane ( hcaT )
GO:0016021
;
integral to membrane ( hcaT )
|
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PID
|
1788886
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
HCAT_ECOLI
(
Q47142
;
O05660; P77638
)
|
|
- Protein name
|
Probable 3-phenylpropionic acid transporter.
|
|
- Synonyms
|
|
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- Gene name
|
Name=hcaT; OrderedLocusNames=b2536;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
hcaT
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, Crystal Structure Of Lactose Permease
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
Probable 3-phenylpropionic acid transporter
|
|
PSI-BLAST
|
High-affinity glucose transporter SNF3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
COG0477: Permeases of the major facilitator superfamily [Escherichia coli HS]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
|
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PROSITE
|
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PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MVLQSTRWLA LGYFTYFFSY GIFLPFWSVW LKGIGLTPET IGLLLGAGLV ARFLGSLLIA PRVSDPSRLI
0071 SALRVLALLT LLFAVAFWAG AHVAWLMLVM IGFNLFFSPL VPLTDALANT WQKQFPLDYG KVRLWGSVAF
0141 VIGSALTGKL VTMFDYRVIL ALLTLGVASM LLGFLIRPTI QPQGASRQQE STGWSAWLAL VRQNWRFLAC
0211 VCLLQGAHAA YYGFSAIYWQ AAGYSASAVG YLWSLGVVAE VIIFALSNKL FRRCSARDML LISAICGVVR
0281 WGIMGATTAL PWLIVVQILH CGTFTVCHLA AMRYIAARQG SEVIRLQAVY SAVAMGGSIA IMTVFAGFLY
0351 QYLGHGVFWV MALVALPAMF LRPKVVPSC
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcgttacaga catcgggaag caggctcgaa
-070 tattcttatt tttcaacttg caccaacatt cgattaaccc cagactaacg cctcctgacg ggagggactc
0001 atggttttgc aatccacgcg ctggttggcg ctcggctatt tcacatactt ttttagttac ggcatttttc
0071 tacctttctg gagcgtctgg cttaaaggga ttggtttaac gccagaaacc atcggcctgt tattgggggc
0141 aggtctggtt gcccgtttcc tcgggagttt gctcatcgcg ccccgcgtca gcgatccttc ccgcctgatt
0211 tccgccttgc gcgtgctggc actgctgaca cttctctttg ctgtcgcctt ctgggcgggg gcgcacgtag
0281 cgtggctgat gctggtgatg attggcttta acctcttttt ctcaccactg gtaccgttga ccgatgcact
0351 ggcgaatacg tggcaaaagc agttcccgct tgattacggc aaagtgcgac tgtggggctc ggtggcgttt
0421 gtcattggct cggcgctgac gggcaaactg gtcactatgt ttgattatcg ggtgatcctc gcgctgttga
0491 cgttgggcgt ggcatccatg ctgctcggct ttctcatccg tccgacgatt cagccacaag gggcaagtcg
0561 ccagcaggag agcaccggtt ggtctgcgtg gttggcgctg gttcgccaga actggcgctt tctggcctgc
0631 gtttgtttat tgcagggggc acatgcggcc tattacggtt ttagcgccat ttactggcag gcagctggct
0701 actcggcctc ggcggtgggg tatttgtggt cgctgggcgt ggtggcggaa gtcattatct ttgcgctgag
0771 taataaactt ttccgccgtt gtagtgcacg cgatatgctg ttgatctcgg cgatttgcgg cgtagtgcgc
0841 tggggcatta tgggagcaac tacggcgttg ccgtggttga tagtggtgca aattctgcat tgcggcacct
0911 tcacggtctg ccacctggcc gccatgcgtt atattgctgc tcgccagggt agcgaagtca tccgtttaca
0981 ggcggtttac tctgccgtcg cgatgggcgg cagtatcgct atcatgaccg ttttcgccgg tttcctgtat
1051 caatatctgg gccacggcgt gttctgggta atggcgctgg tggcgcttcc ggcaatgttt ttgcgcccga
1121 aagttgttcc ctcatgctga ttcgagcatt ttgcggatct gctcctgttg atgtgttgtc agcgtcaggt
1191 ccgtatagat cagcggtggt gaaaagagcg gtaatggcat ggtataaggc
|
