General information
|
Deletion
|
OCR35-4
|
D or ND
|
D
|
Location (BP)
|
213,711 - 219,594
|
Length (BP)
|
5,884
|
Related strains
|
Strains
|
|
|
System
|
SD2-D69
|
Plasmid Name
|
pR35-3
|
|
Primer
|
Deleted Region
|
5'
|
Primer
|
R35-1A-CmN
|
Sequence
|
5'-AAAgTcAATcAggATTcgcTTAccAccAccgTAccgATTTcTggTgTcccTgTTgATAcc3
|
3'
|
Primer
|
R35-4B-CmC
|
Sequence
|
5'-AggcTgTATgTATcggTTcTgcgcTTAAcATTAcggcgAAcAcTTATTcAggcgTAgcAc-3'
|
Complemented region
|
5'
|
Primer
|
128-7
|
Sequence
|
5'-ccAAgcTTcAgTAcgccTTTggTTTATcc-3'
|
Position
|
216981
|
3'
|
Primer
|
128-8
|
Sequence
|
5'-ccAAgcTTcAAAAccTATgccgTcTggc-3'
|
Position
|
218977
|
Complemented region
|
5'
|
Primer
|
128-5
|
Sequence
|
5'-ccgAATTcgTTggAAcTgTATgAgcAg-3'
|
Position
|
212244
|
3'
|
Primer
|
128-6
|
Sequence
|
5'-ccggATccAcTTAAcTAAgcgTTTTcTgc-3'
|
Position
|
213632
|
Complemented region
|
5'
|
Primer
|
127-9-2
|
Sequence
|
5'-ccggATccATcTcTAcTATcAgAgggc-3'
|
Position
|
208471
|
3'
|
Primer
|
127-10
|
Sequence
|
5'-ccAAgcTTATcATAgccTgcTcAAAccg-3'
|
Position
|
209651
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 GCAGAAAACG CTTAGTTAAG TGAAAGCCGG
-00070 ATAAGACGCA TCAAACGTCG CATCCGGCGA AAGTCAATCA GGATTCGCTT ACCACCACCG TACCGATTTC
000001 CGGGTGGCTA AAGCTGGTAA TTTTATCCAG ACGCAGCTCG CGGGTTTCGC CAGCGGCCTC GACGACCAGG
000071 TACTCCACAT TTTTGCGGGA GACTAAATCA CTGGCTTTTG CCTGCAATTT TTCGCCATCT TTCAGCTCAA
000141 GTGTCAGCAT TAAATGATGC TGGCAGGCGA GCTCAAGATT ATCGTAATCA TCACAATTGA TTGGTTGATA
000211 CGTATCATTC ATTGACATAA TCGCTCACCA GTAAGTTTGC CGCAGCGTAT GCTGCTTTTT CCCTGACAGC
000281 CTCAGAAAGG GCGTCGTCGG CAGCCATTTC ATTCAGCACT TTCAAAACGC AGCCCAGCGC GTCCGGAACG
000351 TATCCTAAGT CTCCGCTGGC GATTTCCGCG TACCGCTTGC GTATTAACTC ACAATATTTT TCCACATGCC
000421 CTCCTGTCAG CACTCTGACT TAACCGTGGA TGCAAGTCTA AGCCTACGAA GATAAACTCT GTTTCGCAAG
000491 GTGACTATAC CACACTCATT TCTGCAATAT CAGCGCCGCA ACTGCACGTA TTCCGTTACA ATGGCCTCCT
000561 GATTCGAAAG GAGTTTTCTT ATGGCGCTTA AAGCGACAAT TTATAAAGCG ACGGTTAATG TGGCCGATCT
000631 CGACCGCAAC CAGTTTCTCG ATGCCTCTCT GACGCTGGCG CGCCATCCTT CAGAAACCCA GGAGCGTATG
000701 ATGCTGCGCT TGCTGGCGTG GCTGAAATAT GCTGATGAAC GTCTGCAATT TACCCGTGGT TTGTGTGCCG
000771 ATGATGAGCC GGAAGCGTGG CTGCGTAACG ATCACCTGGG CATTGATTTG TGGATTGAGC TGGGGCTGCC
000841 GGATGAGCGG CGGATTAAGA AAGCCTGCAC CCAGGCCGCA GAAGTGGCGC TGTTTACCTA TAATAGTCGG
000911 GCGGCGCAAA TCTGGTGGCA GCAAAATCAG AGCAAATGTG TGCAGTTTGC CAATCTTTCC GTCTGGTATC
000981 TGGACGATGA ACAACTGGCG AAAGTAAGCG CCTTTGCCGA TCGTACCATG ACGCTGCAGG CAACGATTCA
001051 GGATGGCGTG ATCTGGTTAT CGGATGATAA GAATAATCTG GAAGTGAACT TAACCGCCTG GCAACAACCT
001121 TCATGATTGT GATTTCCCGA CATGTTGCTA TTCCCGATGG TGAGCTTGAG ATCACCGCCA TTCGTGCGCA
001191 GGGCGCGGGC GGGCAGCATG TTAATAAGAC CTCAACGGCT ATTCATCTGC GTTTTGACAT TCGGGCGTCC
001261 AGCCTGCCAG AGTATTACAA AGAGCGTCTG CTCGCCGCCA GCCATCATTT GATCAGCAGT GATGGCGTGA
001331 TTGTCATTAA GGCACAGGAA TACCGCAGTC AGGAACTGAA CCGCGAAGCA GCTCTGGCCC GGCTGGTGGC
001401 TATGATTAAA GAATTAACAA CAGAAAAAAA AGCCCGACGA CCCACGCGGC CCACCCGTGC ATCGAAAGAG
001471 CGCAGGCTGG CATCGAAAGC ACAAAAATCA AGCGTGAAGG CGATGCGCGG CAAAGTGCGC AGCGGTCGGG
001541 AATAAAAAGA AGGAATGGAT GGTGAAAAAA GCGATAGTGA CAGCGATGGC TGTAATCAGC CTCTTTACTC
001611 TGATGGGATG TAATAATCGG GCCGAAGTCG ATACGCTTTC TCCGGCGCAG GCTGCCGAAC TGAAACCGAT
001681 GCCGCAAAGT TGGCGCGGCG TGCTGCCGTG TGCCGATTGC GAAGGAATCG AAACCTCTCT GTTCCTCGAA
001751 AAAGACGGAA CATGGGTGAT GAATGAGCGT TATCTCGGTG CTCGTGAAGA ACCTTCCTCC TTCGCTTCCT
001821 ACGGTACATG GGCGCGAACC GCTGACAAGC TGGTATTAAC CGACAGCAAA GGTGAAAAGT CATATTATCG
001891 GGCGAAAGGC GATGCGCTGG AGATGCTCGA TCGTGAAGGC AATCCGATTG AATCGCAGTT CAACTATACG
001961 CTGGAAGCGG CACAATCCAG TTTACCTATG ACGCCGATGA CCCTGCGGGG CATGTATTTT TATATGGCTG
002031 ATGCGGCGAC CTTCACTGAT TGCGCGACCG GAAAACGTTT CATGGTAGCG AATAACGCAG AGCTGGAGCG
002101 TAGCTACCTG GCTGCGCGCG GTCACAGTGA AAAACCGGTG TTACTGTCAG TAGAAGGTCA CTTTACGCTT
002171 GAGGGTAATC CGGATACCGG TGCGCCGACT AAAGTATTGG CACCCGATAC GGCAGGGAAA TTTTACCCCA
002241 ACCAGGATTG CAGTAGTTTG GGGCAGTAAC CCGTCTTGAG ACAGAAACAA ACGCAAAACA GGCCAGAAGG
002311 ATATATTTCA ACATTTTGAA TTTGCACGTT TTTTGTAGGC CGGATAAGGC GTTTACGCCG CATCCGGCAA
002381 TGGTGCTCAA CGCCTGATGC GACGCTGGCG CGTCTTATCA TGCCTACAAC CCCCCTCATA CCTTAAGGCG
002451 GATAAGGCAT TTACTTTATC ACCGGGTCAA ACCAACAAAG CGACCCGCCT TGATATAAAT CCCAGGCTTC
002521 AGGTGCCCAA CATACTGTAA CTGCGTTTCT GGCTTAAACG CAGAGACATC ACCAATACGC ATATGCATCA
002591 GATCGGCAGG GCTAATCCAG CCCGATTGCG CCAGTGTAAG TGGATGCCCG GCTTTGGCAA AGGCATCCGT
002661 GACAAATTCC GAACAAAACC ACGACTTTTT GTCTCCTTCG CCCACACTGC TTAACTGCGC TTTCGCCAGG
002731 CCGCTGACGC ACTGTTGGCG AAAATCCTCG GAGAACGGAT TCAGTGAGCA CATCTGGCGA GTCACCATAA
002801 AGGGAATAAA TTCGACAATG CCGCGATAGT TATAACCGCT ATCTTTGATT TTATTGGCAA ACGCGGTGAT
002871 ATCTGTGGCT TGTTGCGGGG TAAGATCCGG GACTCGTAAG ACGAAAAGCT TATCACTATG CTTCATCGCT
002941 TTTTTAAGGG AAACGATCTG GACGCCAGCG CCTGTCGCTT CTGCAACGTT ATTATCACCC AGAAAGATTG
003011 CAACGTGACT CACAGAGGAA GTGCTGAAGA CGCGGATTCC AAATGAGGTT ACCCCAAGGC TTGAGGAGAA
003081 CAGCAAATCG CCGGGTTTGA GATCAGGTGC CGTTATTTCT TTTATTGATT GTTCGGTGAA AGAGCTTTGA
003151 TGCTGGAATT TGACAGCCCA TGTTTTTGCC TCGGCATCTA CTGCTGTGGC TGATGGGTCT GGCTGGCTGA
003221 TATCAACGGT ACAAGCCGAA AGTAAAAGAA AGCTGGGGAG AAACAGGCGG CAGTACGCCT TTGGTTTATC
003291 CATTTTATAC AATCCATGTA AAAAAAGGGC CCTGAAATTC AGGACCCTTT CTGGCATCAG CCTTTAATCT
003361 GTTTCACCAG ATATTCGACG ATGTCACCAG TCTTAATTAA CTGTTTCTCG CCGTTGCGAC GATATTTATA
003431 TTCGATATCG TCGTTGTCGA GGTTACGGTC GCCCAGCACA ATAGTGTGCG GAATACCGAT CAGTTCCATA
003501 TCAGCAAACA TCACGCCCGG ACGCTCTTTG CGGTCATCCA GCAGCACTTC GATACCTTGT GCACGCAGTT
003571 CGCTGTACAG TTTCTCAGCA AGCTCTTGTA CGCGGAAGGA TTTGTGCATG TTCATCGGCA GAATCGCCAC
003641 CTGGAACGGC GCGATAGCGT CAGGCCATAC GATGCCTCGT TCGTCGTAGT TCTGCTCAAT CGCCGCAGCT
003711 ACCACACGCG TTACCCCGAT ACCGTAGCAA CCCATCGTCA GGATTTGGTT ACGGCCATCT TCACCCTGTA
003781 CGGAGGCTTT CAGTGCTTCG GAGTACTTGG TACCCAGCTG GAAGATGTGA CCAACTTCGA TACCACGTTT
003851 GATCAGCAGC CTACCCTGGC CATCCGGGCT TGGATCGCCA GCCACCACGT TACGGATATC TGCAACTTCC
003921 GGGGTAGCGA CATCGCGATC CCAGTTGATG CCGAAGTAGT GTTTACCATC GATGTTAGCA CCAGCAGCGA
003991 AATCACTCAT CGCCGCAACG GTACGGTCAA TCACCACCGG AATCGGCATG TTTACCGGAC CCAGTGAACC
004061 CGGACCGGCT TTAACCACGG CACGAATTTC TTCTTCGGTC GCGAAAGTCA GCGGGCTTGC AACCTGCGGC
004131 AGTTTTTCTG CTTTAACTTC GTTCAGCTCG TGATCACCGC GCACCAGCAG CGCAACCTGC GGGAAGCTGC
004201 TGCCTTCAAC CGCTTTAACC AGCAGAGTCT TAACCGTTTT CTCAATCGGC AGATTGAACT GTTCAACCAG
004271 TTCCGCGATG GTTTTCGCGT TCGGCGTATC AACCAGCGTC ATTTCCTGGG TAGCAGCAGC GCGCGGTTCT
004341 TTCGGCGCGA TAGCTTCTGC CAGTTCAATG TTCGCTGCAT AGTCAGAGGT GTCGGAGAAG ACCACATCGT
004411 CTTCACCGCT CTGCGCCAGC ACCTGGAATT CGTGAGAGGC GCTGCCGCCG ATAGAACCGG TGTCGGCTTG
004481 TACGGCGCGG AAATCCAGCC CCATGCGGCT GAAGATTTTG CTGTAGGCCG CATACATTGC ATCGTAGGTT
004551 TCCTGCAGGG ATTCCTGAGA AGTATGGAAA GAGTAAGCAT CTTTCATCAG GAATTCGCGG GAACGCATGA
004621 CGCCGAAACG CGGACGCACT TCGTCGCGGA ACTTGGTCTG GATCTGATAG AAGTTCAGCG GCAGCTGTTT
004691 GTAAGAGCTA AGCTCGTTAC GAATCAGGTC AGTGATAACT TCTTCATGAG TTGGGCCGAG TACGAACGGA
004761 CGCTCGCCAC GGTCAACAAA ACGCAGCAGT TCCGGACCGT ACTGTTCCCA ACGACCACTC TCTTGCCACA
004831 AATCGGCTGG CTGAACCACC GGCATCGACA CCTCGATCGC ACCGGCGTTG TTCATCTCTT CACGCACGAT
004901 GTTTTCGACT TTTTTCAGAA CGCGCACGCC GGTCGGCAGC CAGGTATATA ACCCGGAGGC CAGCTTGCGG
004971 ATCATCCCGG CGCGCAGCAT CAGCTGATGG CTGATCACCT CGGCGTCGGC AGGTGTCTCC TTGAGAGTGG
005041 AGAGCAGGTA TTGGCTAGTA CGCATGTTGT TACGGTTCCA GTTGGAAGGT AGAACAGGCT CAAGGCGAGC
005111 CTGGGACAAA AAAAAGTGAT TTAGTTTACC AGTGCAAAAG AAATGTCAAA AGAGAAGGGC GTGAATTTAA
005181 CGCGGTTCCA GCGCAAAGAC TTCAAAACCT GCGTCGGTGA CGCGCCAGCG AACGTTAAAA TCATGTAGCC
005251 AGACGGCATA GGTTTTGCCC GTTTCCTCAC CTTTACGATA GGCCGGGCGC GGGTCCTGCG CCAGTACTTC
005321 GCGGATAAAC AGCGTTAACT GCGGATAACG CTTCTCCAGC GTCAAAAGCT GCTTTTCGAC CTCTGCGGTA
005391 AAACTCACCG CCATCTCTGC AGCTGGCGCA CTTTGCGCAT AGCTGGCACT GGCATCGGGA AGCGATTCGG
005461 CAAAGGGGAG ATACGGTTTG ATATCCACTA CCGGCGTACC ATCGACCAGA TCCAGACTGC CGAGCTTCAG
005531 AATCACGCTG TCTTTATGGC AAACAACCTC TTTCAGCTCT ACCAGCGACA TGCCAATTGG GTTAGGGCGG
005601 AAAGTAGAGC GTGTTGCGAA AACCCCCATT CTGGCGTTAC CGCCGAGGCG CGGTGGACGC ACAGTCGGAC
005671 GCCAGCCGCC TTCCATCGTT TGATGAAAGA CGAAAAGGAT CCATAAATGG CTGAACGCTT CCAGGCCGCG
005741 AACGGCGTCG GCCTGGTTGT AGGGAGCAAT GAGATGCAGT TCGCCGTTGG CGCTTTTTAC CAGACCTGGC
005811 TGGCGCGGAA CGGCGAACTT TTCTTTATAG GGCGAGCGAA TAACGCCTAT TTGCTCGAAC TGGAAACTGC
005881 TCATTTCGCC GTAATGTTAA GCGCAGAACC GATACATACA GCCTGACGAT AGCAGCCTGG CGTACCGCTG
005951 GTGACTTCGC AGCTATGCAG TAATACAGCA TTGG
|