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General information
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Deletion
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OCR27-9
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D or ND
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D
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Location (BP)
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20,549 - 28,227
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Length (BP)
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7,679
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Related strains
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Strains
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System
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SD2-D170
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Plasmid Name
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mS-[A (rpsT-rihC)]
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Primer
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Deleted Region
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5'
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Primer
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R27-9A-CmN
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Sequence
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5'-TggAgcAccTcAAAAAcAccATcATAcAcTAAATcAgTAAcTggTgTcccTgTTgATAcc-3'
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3'
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Primer
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R27-9B-CmC
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Sequence
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5'-ggAgggATATcAgTgAAAggcATgAgTcgATgAATgAcTgcAcTTATTcAggcgTAgcAc-3'
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Complemented region
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5'
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Primer
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113-13
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Sequence
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5'-caaagcttcagcaaattggcgattaagcc-3'
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Position
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20793
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3'
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Primer
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113-12
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Sequence
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5'-ccgaattcacatgtgacaggttacgacg-3'
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Position
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28219
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Sequences
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Nucleotide
Fasta Format
View sequence out neighbor 100bp
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-00100 GTTACGCACC ACCCCGTCAG TAGCTGAACA
-00070 GGAGGGACAG CTGATAGAAA CAGAAGCCAC TGGAGCACCT CAAAAACACC ATCATACACT AAATCAGTAA
000001 GTTGGCAGCA TCACCTACCT CAATGTGTAT CACAATATCC ATATTCTTTG TGGGGGAGTC TGGAGATTGA
000071 GTAGATATTC TTGTTCAGAA TGTATCAGCC GATGGTTCTA CGATTCTTAA GCCACGAAGA GTTCAGATAG
000141 TACAACGGCA TGTCTCTTTT GACTATCTGG CAACCGGCAG TGTGTTCTCT CACGCATCAC AAAAGCAGCA
000211 GGCATAAAAA AACCCGCTTG CGCGGGCTTT TTCACAAAGC TTCAGCAAAT TGGCGATTAA GCCAGTTTGT
000281 TGATCTGTGC AGTCAGGTTA GCCTTATGAC GTGCAGCTTT GTTTTTGTGG ATCAGACCTT TAGCAGCCTG
000351 ACGGTCCACG ATCGGTTGCA TTTCGTTAAA TGCTTTCTGT GCAGCAGCTT TGTCGCCAGC TTCGATAGCT
000421 GCGTATACTT TCTTGATGAA AGTACGCATC ATAGAGCGAC GGCTTGCGTT GTGCTTACGA GCCTTTTCAG
000491 ACTGAATGGC GCGCTTCTTA GCTGATTTGA TATTAGCCAA GGTCCAACTC CCAAATGTGT TCTATATGGA
000561 CAATTCAAAG GCCGAGGAAT ATGCCCTTTT AGCCTTCTTT TGTCAATGGA TTTGTGCAAA TAAGCGCCGT
000631 TAATGTGCCG GCACTCGTTA CGTAGTGATG GCGCAGGATT CTACCAGCTT GCGGGGTGTG AATACAGCTT
000701 TTCCGCGATA AAAATTGCAG CAGGCGGTCA GTTTCTTCCC GTGATTTGCG CCATGGCAAT GAAAAGCCAC
000771 TTCTTTCTGA TTTCGGTACT CAATCGCCGG TTAACCTTGA CCGCTGTACA AGGTATACTC GGACGATTTT
000841 CACTGTTTTG AGCCAGACAT GAAGCTGATA CGCGGCATAC ATAATCTCAG CCAGGCCCCG CAAGAAGGGT
000911 GTGTGCTGAC TATTGGTAAT TTCGACGGCG TGCATCGCGG TCATCGCGCG CTGTTACAGG GCTTGCAGGA
000981 AGAAGGGCGC AAGCGCAACT TACCGGTGAT GGTGATGCTT TTTGAACCTC AACCACTGGA ACTGTTTGCT
001051 ACCGATAAAG CCCCGGCAAG ACTGACCCGG CTGCGGGAAA AACTGCGTTA CCTTGCAGAG TGTGGCGTTG
001121 ATTACGTGCT GTGCGTGCGT TTCGACAGGC GTTTCGCGGC GTTAACCGCG CAAAATTTCA TCAGCGATCT
001191 TCTGGTGAAG CATTTGCGCG TAAAATTTCT TGCCGTAGGT GATGATTTCC GCTTTGGCGC TGGTCGTGAA
001261 GGCGATTTCT TGTTATTACA GAAAGCTGGC ATGGAATACG GCTTCGATAT CACCAGTACG CAAACTTTTT
001331 GCGAAGGTGG CGTGCGCATC AGCAGCACCG CCGTGCGTCA GGCCCTTGCG GATGACAATC TGGCTCTGGC
001401 AGAGAGTTTA CTGGGGCACC CGTTTGCCAT CTCCGGGCGT GTAGTCCACG GTGATGAATT AGGGCGCACT
001471 ATAGGTTTCC CGACGGCGAA TGTACCGCTG CGCCGTCAGG TTTCCCCGGT GAAAGGGGTT TATGCGGTAG
001541 AAGTGCTGGG CCTCGGTGAA AAGCCGTTAC CCGGCGTGGC AAACATCGGA ACACGCCCAA CGGTTGCCGG
001611 TATTCGCCAG CAGCTGGAAG TGCATTTGTT AGATGTTGCA ATGGACCTTT ACGGTCGCCA TATACAAGTA
001681 GTGCTGCGTA AAAAAATACG CAATGAGCAG CGATTTGCGT CGCTGGACGA ACTGAAAGCG CAGATTGCGC
001751 GTGATGAATT AACCGCCCGC GAATTTTTTG GGCTAACAAA ACCGGCTTAA GCCTGTTATG TAATCAAACC
001821 GAAATACGGA ACCGAGAATC TGATGAGTGA CTATAAATCA ACCCTGAATT TGCCGGAAAC AGGGTTCCCG
001891 ATGCGTGGCG ATCTCGCCAA GCGCGAACCC GGAATGCTGG CGCGTTGGAC TGATGATGAT CTGTACGGCA
001961 TCATCCGTGC GGCTAAAAAA GGCAAAAAAA CCTTCATTCT GCATGATGGC CCTCCTTATG CGAATGGCAG
002031 CATTCATATT GGTCACTCGG TTAACAAGAT TCTGAAAGAC ATTATCGTGA AGTCCAAAGG GCTTTCCGGT
002101 TATGACTCGC CGTATGTGCC TGGCTGGGAC TGCCACGGTC TGCCGATCGA GCTGAAAGTC GAGCAAGAAT
002171 ACGGTAAGCC GGGTGAGAAA TTCACCGCCG CCGAGTTCCG CGCCAAGTGC CGCGAATACG CGGCGACCCA
002241 GGTTGACGGT CAACGCAAAG ACTTTATCCG TCTGGGCGTG CTGGGCGACT GGTCGCACCC GTACCTGACC
002311 ATGGACTTCA AAACTGAAGC CAACATCATC CGCGCGCTGG GCAAAATCAT CGGCAACGGT CACCTGCACA
002381 AAGGCGCGAA GCCAGTTCAC TGGTGCGTTG ACTGCCGTTC TGCGCTGGCG GAAGCGGAAG TTGAGTATTA
002451 CGACAAAACT TCTCCGTCCA TCGACGTTGC TTTCCAGGCA GTCGATCAGG ATGCACTGAA AGCAAAATTT
002521 GCCGTAAGCA ACGTTAACGG CCCAATCTCG CTGGTAATCT GGACCACCAC GCCGTGGACT CTGCCTGCCA
002591 ACCGCGCAAT CTCTATTGCA CCAGATTTCG ACTATGCGCT GGTGCAGATC GACGGTCAGG CCGTGATTCT
002661 GGCGAAAGAT CTGGTTGAAA GCGTAATGCA GCGTATCGGC GTGACCGATT ACACCATTCT CGGCACGGTA
002731 AAAGGTGCGG AGCTTGAGCT GCTGCGCTTT ACCCATCCGT TTATGGGCTT CGACGTTCCG GCAATCCTCG
002801 GCGATCACGT TACCCTGGAT GCCGGTACCG GTGCCGTTCA CACCGCGCCT GGCCACGGCC CGGACGACTA
002871 TGTGATCGGT CAGAAATACG GCCTGGAAAC CGCTAACCCG GTTGGCCCGG ACGGCACTTA TCTGCCGGGC
002941 ACTTATCCGA CGCTGGATGG CGTGAACGTC TTCAAAGCGA ACGACATCGT CGTTGCGCTG CTGCAGGAAA
003011 AAGGCGCGCT GCTGCACGTT GAGAAAATGC AGCACAGCTA TCCGTGCTGC TGGCGTCACA AAACGCCGAT
003081 CATCTTCCGC GCGACGCCGC AGTGGTTCGT CAGCATGGAT CAGAAAGGTC TGCGTGCGCA GTCACTGAAA
003151 GAGATCAAAG GCGTGCAGTG GATCCCGGAC TGGGGCCAGG CGCGTATCGA GTCGATGGTT GCTAACCGTC
003221 CTGACTGGTG TATCTCCCGT CAGCGCACCT GGGGTGTACC GATGTCACTG TTCGTGCACA AAGACACGGA
003291 AGAGCTGCAT CCGCGTACCC TTGAACTGAT GGAAGAAGTG GCAAAACGCG TTGAAGTCGA TGGCATCCAG
003361 GCGTGGTGGG ATCTCGATGC GAAAGAGATC CTCGGCGACG AAGCTGATCA GTACGTGAAA GTGCCGGACA
003431 CATTGGATGT ATGGTTTGAC TCCGGATCTA CCCACTCTTC TGTTGTTGAC GTGCGTCCGG AATTTGCCGG
003501 TCACGCAGCG GACATGTATC TGGAAGGTTC TGACCAACAC CGCGGCTGGT TCATGTCTTC CCTAATGATC
003571 TCCACCGCGA TGAAGGGTAA AGCGCCGTAT CGTCAGGTAC TGACCCACGG CTTTACCGTG GATGGTCAGG
003641 GCCGCAAGAT GTCTAAATCC ATCGGCAATA CCGTTTCGCC GCAGGATGTG ATGAACAAAC TGGGCGCGGA
003711 TATTCTGCGT CTGTGGGTGG CATCAACCGA CTACACCGGT GAAATGGCCG TTTCTGACGA GATCCTGAAA
003781 CGTGCTGCCG ATAGCTATCG TCGTATCCGT AACACCGCGC GCTTCCTGCT GGCAAACCTG AACGGTTTTG
003851 ATCCAGCAAA AGATATGGTG AAACCGGAAG AGATGGTGGT ACTGGATCGC TGGGCCGTAG GTTGTGCGAA
003921 AGCGGCACAG GAAGACATCC TCAAGGCGTA CGAAGCATAC GATTTCCACG AAGTGGTACA GCGTCTGATG
003991 CGCTTCTGCT CCGTTGAGAT GGGTTCCTTC TACCTCGACA TCATCAAAGA CCGTCAGTAC ACCGCCAAAG
004061 CGGACAGTGT GGCGCGTCGT AGCTGCCAGA CTGCGCTATA TCACATCGCA GAAGCGCTGG TGCGCTGGAT
004131 GGCACCAATC CTCTCCTTCA CCGCTGATGA AGTGTGGGGC TACCTGCCGG GCGAACGTGA AAAATACGTC
004201 TTCACCGGTG AGTGGTACGA AGGCCTGTTT GGCCTGGCAG ACAGTGAAGC GATGAACGAT GCGTTCTGGG
004271 ACGAGCTGTT GAAAGTGCGT GGCGAAGTGA ACAAAGTCAT TGAGCAAGCG CGTGCCGACA AGAAAGTGGG
004341 TGGCTCGCTG GAAGCGGCAG TAACCTTGTA TGCAGAACCG GAACTGTCGG CGAAACTGAC CGCGCTGGGC
004411 GATGAATTAC GATTTGTCCT GTTGACCTCC GGCGCTACCG TTGCAGACTA TAACGACGCA CCTGCTGATG
004481 CTCAGCAGAG CGAAGTACTC AAAGGGCTGA AAGTCGCGTT GAGTAAAGCC GAAGGTGAGA AGTGCCCACG
004551 CTGCTGGCAC TACACCCAGG ATGTCGGCAA GGTGGCGGAA CACGCAGAAA TCTGCGGCCG CTGTGTCAGC
004621 AACGTCGCCG GTGACGGTGA AAAACGTAAG TTTGCCTGAT GAGTCAATCG ATCTGTTCAA CAGGGCTACG
004691 CTGGCTGTGG CTGGTGGTAG TCGTGCTGAT TATCGATCTG GGCAGCAAAT ACCTGATCCT CCAGAACTTT
004761 GCTCTGGGGG ATACGGTCCC GCTGTTCCCG TCGCTTAATC TGCATTATGC GCGTAACTAT GGCGCGGCGT
004831 TTAGTTTCCT TGCCGATAGC GGCGGCTGGC AGCGTTGGTT CTTTGCCGGT ATTGCGATTG GTATTAGCGT
004901 GATCCTGGCA GTGATGATGT ATCGCTCGAA GGCCACGCAG AAGCTAAACA ATATCGCTTA CGCGCTGATT
004971 ATTGGCGGCG CGCTGGGCAA CCTGTTCGAC CGCCTGTGGC ACGGCTTCGT TGTCGATATG ATCGACTTCT
005041 ACGTCGGCGA CTGGCACTTC GCCACCTTCA ACCTTGCCGA TACTGCCATC TGTGTCGGTG CGGCACTGAT
005111 TGTGCTGGAA GGTTTTTTGC CTTCTAGAGC GAAAAAACAA TAATAAACCC TGCCGGATGC GATGCTGACG
005181 CATCTTATCC GGCCTACAGA TTGCTGCGAA ATCGTAGGCC GGATAAGGCG TTTACGCCGC ATCCGGCAAA
005251 AATCCTTAAA TATAAGAGCA AACCTGCATG TCTGAATCTG TACAGAGCAA TAGCGCCGTC CTGGTGCACT
005321 TCACGCTAAA ACTCGACGAT GGCACCACCG CCGAGTCTAC CCGCAACAAC GGTAAACCGG CGCTGTTCCG
005391 CCTGGGTGAT GCTTCTCTTT CTGAAGGGCT GGAGCAACAC CTGTTGGGGC TGAAAGTGGG CGATAAAACC
005461 ACCTTCTCGT TGGAGCCAGA TGCGGCGTTT GGCGTGCCGT CACCGGACCT GATTCAGTAC TTCTCCCGCC
005531 GTGAATTTAT GGATGCAGGC GAGCCAGAAA TTGGCGCAAT CATGCTTTTT ACCGCAATGG ATGGCAGTGA
005601 GATGCCTGGC GTGATCCGCG AAATTAACGG CGACTCCATT ACCGTTGATT TCAACCATCC GCTGGCCGGG
005671 CAGACCGTTC ATTTTGATAT TGAAGTGCTG GAAATCGATC CGGCACTGGA GGCGTAACAT GCAGATCCTG
005741 TTGGCCAACC CGCGTGGTTT TTGTGCCGGG GTAGACCGCG CTATCAGCAT TGTTGAAAAC GCGCTGGCCA
005811 TTTACGGCGC ACCGATATAT GTCCGTCACG AAGTGGTACA TAACCGCTAT GTGGTCGATA GCTTGCGTGA
005881 GCGTGGGGCT ATCTTTATTG AGCAGATTAG CGAAGTACCG GACGGCGCGA TCCTGATTTT CTCCGCACAC
005951 GGTGTTTCTC AGGCGGTACG TAACGAAGCA AAAAGTCGCG ATTTGACGGT GTTTGATGCC ACCTGTCCGC
006021 TGGTGACCAA AGTGCATATG GAAGTCGCCC GCGCCAGTCG CCGTGGCGAA GAATCTATTC TCATCGGTCA
006091 CGCCGGGCAC CCGGAAGTGG AAGGGACAAT GGGCCAGTAC AGTAACCCGG AAGGGGGAAT GTATCTGGTC
006161 GAATCGCCGG ACGATGTGTG GAAACTGACG GTCAAAAACG AAGAGAAGCT CTCCTTTATG ACCCAGACCA
006231 CGCTGTCGGT GGATGACACG TCTGATGTGA TCGACGCGCT GCGTAAACGC TTCCCGAAAA TTGTCGGTCC
006301 GCGCAAAGAT GACATCTGCT ACGCCACGAC TAACCGTCAG GAAGCGGTAC GCGCCCTGGC AGAACAGGCG
006371 GAAGTTGTGT TGGTGGTCGG TTCGAAAAAC TCCTCCAACT CCAACCGTCT GGCGGAGCTG GCCCAGCGTA
006441 TGGGCAAACG CGCGTTTTTG ATTGACGATG CGAAAGACAT CCAGGAAGAG TGGGTGAAAG AGGTTAAATG
006511 CGTCGGCGTG ACTGCGGGCG CATCGGCTCC GGATATTCTG GTGCAGAATG TGGTGGCACG TTTGCAGCAG
006581 CTGGGCGGTG GTGAAGCCAT TCCGCTGGAA GGCCGTGAAG AAAACATTGT TTTCGAAGTG CCGAAAGAGC
006651 TGCGTGTCGA TATTCGTGAA GTCGATTAAG TCATTAGCAG CCTAAGTTAT GCGAAAATGC CGGTCTTGTT
006721 ACCGGCATTT TTTATGGAGA AAACATGCGT TTACCTATCT TCCTCGATAC TGACCCCGGC ATTGACGATG
006791 CCGTCGCCAT TGCCGCCGCG ATTTTTGCAC CCGAACTCGA CCTGCAACTG ATGACCACCG TCGCGGGTAA
006861 TGTCTCGGTT GAGAAAACTA CCCGCAATGC CCTGCAACTG CTGCATTTCT GGAATGCGGA GATTCCGCTC
006931 GCCCAAGGGG CCGCTGTGCC ACTGGTACGC GCACCGCGTG ATGCGGCATC TGTGCACGGC GAATCGGGAA
007001 TGGCTGGCTA CGACTTTGTT GAGCACAACC GAAAGCCGCT CGGGATACCG GCGTTTCTGG CGATTCGGGA
007071 TGCCCTGATG CGTGCACCAG AGCCTGTTAC CCTGGTGGCC ATCGGCCCGT TAACCAATAT TGCGCTGTTA
007141 CTTTCACAAT GCCCGGAATG CAAGCCGTAT ATTCGCCGTC TGGTGATCAT GGGTGGTTCT GCCGGACGCG
007211 GCAACTGTAC GCCAAACGCC GAGTTTAATA TTGCTGCCGA TCCAGAAGCT GCTGCCTGTG TCTTCCGCAG
007281 TGGTATTGAA ATCGTCATGT GCGGTTTGGA TGTCACCAAT CAGGCAATAT TAACTCCTGA CTATCTCTCT
007351 ACACTGCCGC AGTTAAACCG TACCGGGAAA ATGCTTCACG CCCTGTTTAG CCACTACCGT AGCGGCAGTA
007421 TGCAAAGCGG CTTGCGAATG CACGATCTCT GCGCCATCGC CTGGCTGGTG CGCCCGGACC TGTTCACTCT
007491 CAAACCCTGT TTTGTGGCAG TGGAAACTCA GGGCGAATTT ACCTCAGGCA CGACGGTGGT TGATATCGAC
007561 GGTTGCCTGG GCAAGCCAGC CAATGTACAG GTGGCATTGG ATCTGGATGT GAAAGGCTTC CAGCAGTGGG
007631 TGGCTGAGGT GCTGGCTCTG GCGTCGTAAC CTGTCACATG TTATTGGCAT GCAGTCATTC ATCGACTCAT
007701 GCCTTTCACT GATATCCCTC CCTGTTTATC ATTAATTTCT AATTATCAGC GTTTTTGGCT GGCGGCGTAG
007771 CGATGCGCT
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