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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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J Bacteriol. 1993;175(16):5009-21.
Identification and transcriptional analysis of the Escherichia coli htrE operon which is homologous to pap and related pilin operons.
Raina S, Missiakas D, Baird L, Kumar S, Georgopoulos C.
(
8102362
)
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Deletion
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ppdel-6
(LD)
,
OCR32
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
htrE
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Related strains
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Strains Search
|
Search strains by gene name:
htrE
Search strains by all related name:
htrE b0139 ECK0138 JW0135
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General information (Go to Linear View: )
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Gene Name
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htrE
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Alternative name
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b0139,ECK0138,JW0135
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Location, Length
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152,829 - 155,426
(
-
)
;
3.29
min
;
2598
(bp) ,
865
(aa)
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Product
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putative outer membrane usher protein
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Operon Name
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ecpD-htrE
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Note
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probable outer membrane porin protein involved in fimbrial assembly; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane
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Function
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putative membrane; Surface structures
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Gene Ontology
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GO:0005215
;
transporter activity ( htrE )
GO:0006810
;
transport ( htrE )
GO:0006950
;
response to stress ( htrE )
GO:0009279
;
cell outer membrane ( htrE )
GO:0009289
;
fimbrium ( htrE )
GO:0016020
;
membrane ( htrE )
GO:0016021
;
integral to membrane ( htrE )
GO:0019867
;
outer membrane ( htrE )
GO:0042995
;
cell projection ( htrE )
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PID
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1786332
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EC number
(KEGG Pathway)
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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htrE
(
EG11972
)
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Number of removed
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29 aa cleaved
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SWISS-PROT
(
Show simple
)
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Entry name(Acc.no)
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HTRE_ECOLI
(
P33129
)
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- Protein name
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Outer membrane usher protein htrE precursor
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- Synonyms
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Heat shock protein E
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- Gene name
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Name=htrE; OrderedLocusNames=b0139;
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- Comments
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FUNCTION:Probable porin-like protein necessary for the assembly of a pilin-type protein.
SUBCELLULAR LOCATION:Integral membrane protein. Outer membrane (By similarity).
INDUCTION:By heat shock.
SIMILARITY:Belongs to the fimbrial export usher family.
CAUTION:Ref.2 sequence differs from that shown due to a frameshift in position 481 which creates two separate ORFs.
CAUTION:Ref.1 sequence was incorrect in position 861 onward due to a cloning artifact.
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Entry name(Acc.no)
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Q8CWD7
(
Q8CWD7
)
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- Protein name
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Outer membrane usher protein htrE.
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- Synonyms
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- Gene name
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Name=htrE; OrderedLocusNames=c0170;
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- Comments
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SUBCELLULAR LOCATION:Integral membrane protein. Outer membrane (By similarity).
SIMILARITY:Belongs to the fimbrial export usher family.
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Entry name(Acc.no)
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Q8X3Z8
(
Q8X3Z8
)
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- Protein name
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Putative fimbrial usher protein.
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- Synonyms
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- Gene name
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Name=htrE; OrderedLocusNames=z0150;
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- Comments
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SIMILARITY:Contains 1 fibronectin type III domain.
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MMBR References
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J Bacteriol. 1993;175:5009-5021
Identification and transcriptional analysis of the Escherichia coli htrE operon which is homologous to pap and related pilin operons.
Raina, S., D. Missiakas, L. Baird, S. Kumar, and C. Georgopoulos.
|
| Sequences |
Amino acid
FASTA format
|
0001 MTIEYTKNYH HLTRIATFCA LLYCNTAFSA ELVEYDHTFL MGQNASNIDL SRYSEGNPAI PGVYDVSVYV
0071 NDQPIINQSI TFVAIEGKKN AQACITLKNL LQFHINSPDI NNEKAVLLAR DETLGNCLNL TEIIPQASVR
0141 YDVNDQRLDI DVPQAWVMKN YQNYVDPSLW ENGINAAMLS YNLNGYHSET PGRKNESIYA AFNGGMNLGA
0211 WRLRASGNYN WMTDSGSNYD FKNRYVQRDI ASLRSQLILG ESYTTGETFD SVSIRGIRLY SDSRMLPPTL
0281 ASFAPIIHGV ANTNAKVTIT QGGYKIYETT VPPGAFVIDD LSPSGYGSDL IVTIEESDGS KRTFSQPFSS
0351 VVQMLRPGVG RWDISGGQVL KDDIQDEPNL FQASYYYGLN NYLTGYTGIQ ITDNNYTAGL LGLGLNTSVG
0421 AFSFDVTHSN VRIPDDKTYQ GQSYRVSWNK LFEETSTSLN IAAYRYSTQN YLGLNDALTL IDEVKHPEQD
0491 LEPKSMRNYS RMKNQVTVSI NQPLKFEKKD YGSFYLSGSW SDYWASGQNR SNYSIGYSNS TSWGSYSVSA
0561 QRSWNEDGDT DDSVYLSFTI PIEKLLGTEQ RTSGFQSIDT QISSDFKGNN QLNVSSSGYS DNARVSYSVN
0631 TGYTMNKASK DLSYVGGYAS YESPWGTLAG SISANSDNSR QVSLSTDGGF VLHSGGLTFS NDSFSDSDTL
0701 AVVQAPGAQG ARINYGNSTI DRWGYGVTSA LSPYHENRIA LDINDLENDV ELKSTSAVAV PRQGSVVFAD
0771 FETVQGQSAI MNITRSDGKN IPFAADIYDE QGNVIGNVGQ GGQAFVRGIE QQGNISIKWL EQSKPVSCLA
0841 HYQQSPEAEK IAQSIILNGI RCQIQ
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcaaaagtgc atttttacgc cattaatgac
-070 tttggtggcg caattgaagg taatgccagg ctgtaatcag gcaaggatat aattccgcag gaagcatagc
0001 gtgactatag aatatactaa aaattatcat catctgaccc gtatcgccac gttttgcgcg ctgctgtatt
0071 gcaatactgc tttcagtgct gaactcgttg aatatgacca taccttcctg atggggcaga atgcatctaa
0141 tattgatctc agccggtaca gtgaaggtaa ccccgctata ccgggtgttt acgacgtcag tgtttatgta
0211 aacgaccaac caatcattaa ccaaagtatt acatttgtcg caattgaagg aaaaaagaac gcccaggctt
0281 gtatcacatt aaagaattta ttgcagtttc atattaattc tcccgatata aataacgaaa aagccgttct
0351 gcttgccagg gatgaaacgc tcggcaattg cctcaatttg acggaaatta tccctcaggc ttctgttcgt
0421 tatgacgtta acgatcaacg tctggatata gacgttcctc aagcctgggt aatgaaaaat taccaaaact
0491 atgttgatcc atcgttatgg gaaaacggca ttaatgcggc catgttgtca tacaacctca acggatatca
0561 tagtgaaacc cctggtcgaa aaaatgaaag catttatgct gcatttaacg gtgggatgaa tttaggtgca
0631 tggcgactgc gtgcctcggg caactacaac tggatgaccg attctggcag taattatgat tttaagaatc
0701 ggtatgttca gcgtgatatc gcctcgctgc gttctcaact cattcttggt gagtcttata cgacgggcga
0771 aacctttgat tccgtcagta tccgaggcat tcgtttatac agtgacagcc gcatgttgcc tccgacttta
0841 gccagctttg cgcctatcat tcatggcgtt gccaatacca acgccaaagt cactattacg caaggtggct
0911 ataagattta tgaaacgacg gtgccgccag gcgctttcgt cattgatgat ctgagtccgt cagggtacgg
0981 cagcgatctt attgttacca tcgaagaatc cgatggctca aagcggacat tctcgcaacc tttctcatcc
1051 gttgttcaaa tgttacgccc tggcgttgga cgttgggata ttagcggcgg tcaggtctta aaagatgata
1121 ttcaggatga gcctaattta tttcaagcaa gctactacta cggcctgaat aactatctga cgggttatac
1191 cggtattcag ataaccgata ataactatac cgctggtttg ttaggtcttg gtctgaatac ttcagttggt
1261 gcattttctt tcgatgtgac tcattccaat gttcgtatcc cggatgataa aacataccag gggcaaagtt
1331 atcgtgtttc ctggaacaag ttattcgaag aaacaagtac ttcactgaat atcgcggcct atcgctattc
1401 gacacagaat taccttggtc ttaatgatgc actaactcta attgatgaag tgaaacatcc cgaacaagat
1471 cttgaaccga aatccatgcg taattactca cgcatgaaaa atcaggttac ggtcagtatt aaccaaccgt
1541 tgaaatttga gaaaaaagat tacggttcat tttatctttc cggaagttgg tccgattact gggcttccgg
1611 acaaaatcgt agcaattact ctattggcta cagtaacagt acatcctggg gcagctacag tgtcagtgcc
1681 cagcgttcat ggaatgaaga cggcgacact gacgatagcg tttatcttag tttcaccatt ccaattgaaa
1751 aattacttgg cactgaacaa cgtacttcag gtttccagag tattgatact caaataagca gtgactttaa
1821 gggtaataac caactcaacg ttagcagcag tggctatagc gataacgctc gcgtcagtta tagcgtgaat
1891 actggctata cgatgaataa agccagcaaa gatttgagtt atgttggggg ttatgccagc tatgagtcac
1961 catggggaac gctggcaggt tcaatttctg caaatagcga taacagccgt caagtttctc tcagcaccga
2031 cggtggtttt gtattgcata gcggtggact gactttcagt aatgatagtt ttagcgactc cgatacactg
2101 gcggtagttc aggctccagg tgctcaagga gcgcgaataa attatggcaa cagtactatc gatcgatggg
2171 gttatggtgt caccagcgct ctttctcctt atcatgaaaa ccgtatcgcg ctggatatca acgatcttga
2241 gaacgatgtt gaattaaaaa gtaccagtgc agtagctgta ccgcgtcagg gttcagtcgt ctttgctgat
2311 tttgaaaccg tgcaagggca atcagccatt atgaacatca cacgaagtga tggtaaaaat attccatttg
2381 ctgcagatat ttatgatgag caaggcaatg tcattggtaa tgttggacag ggtggacaag catttgttcg
2451 tggtattgag cagcagggaa atatcagcat taaatggctc gaacaaagta aacccgtaag ttgtcttgcg
2521 cattatcaac aaagcccaga agcagaaaaa atagcacaat ctattattct gaatggaatt cggtgtcaga
2591 ttcagtaact acaagggacg tcaaatgata aaaacaacgc cacataaaat agtgatactg atgggaatat
2661 tattatcacc ctcagtattt gcaacggata ttaatgta
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