MG1655
W3110
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Gene Report : nadC
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCR31 (D)  ,  OCR31-2 (D)  ,  OCR31-7 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  nadC
Related strains
     Strains Search Search strains by gene name:  nadC   Search strains by all related name:  nadC b0109 ECK0108 JW0105

General information  (Go to Linear View:)
 Gene Name nadC  
 Alternative name b0109,ECK0108,JW0105  
 Location, Length 117,752 - 118,645 (  -  ) ;   2.54 min ; 894 (bp) ,   297 (aa) Go to Linear View
 Product quinolinate phosphoribosyltransferase  
 Operon Name nadC  
 Note GO_process: GO:0009435 - NAD biosynthetic process  
 Function enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide  
 Gene Ontology GO:0003824 ; catalytic activity ( nadC )
GO:0004514 ; nicotinate-nucleotide diphosphorylase (carboxylating) activity ( nadC )
GO:0005515 ; protein binding ( nadC )
GO:0008152 ; metabolic process ( nadC )
GO:0009435 ; NAD biosynthetic process ( nadC )
GO:0016740 ; transferase activity ( nadC )
GO:0016757 ; transferase activity, transferring glycosyl groups ( nadC )
GO:0019363 ; pyridine nucleotide biosynthetic process ( nadC )
 PID 1786299  
 EC number
  (KEGG Pathway)
 
2.4.2.19  
SWISS-PROT  ( Show simple )
  botton Entry name(Acc.no) NADC_ECOLI ( P30011 )
    -  Protein name Nicotinate-nucleotide pyrophosphorylase [carboxylating]  
    -  Synonyms EC 2.4.2.19, Quinolinate phosphoribosyltransferase [decarboxylating], QAPRTase  
    -  Gene name Name=nadC; OrderedLocusNames=b0109;  
    -  Comments
  • CATALYTIC ACTIVITY:Nicotinate D-ribonucleotide + diphosphate + CO(2) = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate.
  • PATHWAY:NAD biosynthesis; aspartate to NaMN; third (last) step.
  • SUBUNIT:Homodimer.
  • SIMILARITY:Belongs to the nadC/modD family.
  • CAUTION:Ref.2 sequence differs from that shown due to a frameshift in position 117.  
  •   botton Entry name(Acc.no) Q8FL52 ( Q8FL52 )
        -  Protein name Nicotinate-nucleotide pyrophosphorylase  
        -  Synonyms EC 2.4.2.19  
        -  Gene name Name=nadC; OrderedLocusNames=c0128;  
        -  Comments
  • SIMILARITY:Belongs to the ABC transporter family.  
  •   botton Entry name(Acc.no) Q8X973 ( Q8X973 )
        -  Protein name Quinolinate phosphoribosyltransferase.  
        -  Synonyms  
        -  Gene name Name=nadC; OrderedLocusNames=z0119;  
        -  Comments
  • SIMILARITY:Belongs to the 2-oxoacid dehydrogenase family.
  • SIMILARITY:Contains 3 lipoyl-binding domains.  

  •  Linear View (Whole Mode)
    View Location
       105.0  –  130.0 (KBP)

    Homology Analysis
    BLAST
        Bacteria
             GTOP nadC (  homologous genes of other bacterias  )  
        PDB     (database updated : 2007.02.20 )
             PSI-BLAST Chain A, Quinolinic Acid Phosphoribosyltransferase With Bound Quinolinic Acid  
        SWISS-PROT     (database updated : 2007.02.20 )
             BLAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]  
             PSI-BLAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]
        nr     (database updated : 2007.02.20 )
             BLAST nicotinate-nucleotide pyrophosphorylase [Escherichia coli K12]  
    Pfam 28.0   (database updated : 2015-05 )
        Pfam
    PROSITE
        PROSITE ASN_GLYCOSYLATION    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION    LEUCINE_ZIPPER     

    Other Cross-Reference
        COG COG0157H 
        EcoCyc nadC 

    MMBR References
    J Gen Microbiol. 1980;121(2):277-92.
    Molecular cloning of the pyruvate dehydrogenase complex genes of Escherichia coli.
    Guest JR, Stephens PE. ( 6455499 )
    J Gen Microbiol. 1983;129(3):671-80.
    Hybrid plasmids containing the pyruvate dehydrogenase complex genes and gene-DNA relationships in the 2 to 3 minute region of the Escherichia coli chromosome.
    Guest JR, Roberts RE, Stephens PE. ( 6308128 )
    J Gen Microbiol. 1981;127:65-79.
    Organization and expression of the pyruvate dehydrogenase complex genes of Escherichia coli K12.
    Guest, J. R., S. T. Cole, and K. Jeyaseelan.
    J Gen Microbiol. 1977;99(2):263-76.
    Biochemical genetics of the alpha-keto acid dehydrogenase complexes of Escherichia coli K12: isolation and biochemical properties of deletion mutants.
    Langley D, Guest JR. ( 327021 )
    J Gen Microbiol. 1978;106(1):103-17.
    Biochemical genetics of the alpha-keto acid dehydrogenase complexes of Escherichia coli K12: genetic characterization and regulatory properties of deletion mutants.
    Langley D, Guest JR. ( 349114 )
    J Bacteriol. 1988;170(1):463-7.
    Genetic and molecular characterization of the guaC-nadC-aroP region of Escherichia coli K-12.
    Roberts RE, Lienhard CI, Gaines CG, Smith JM, Guest JR. ( 3275629 )

    Sequences
    Amino acid
    FASTA format
    0001 MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD ANNDITAKLL PENSRSHATV ITRENGVFCG 
    0071 KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQSLFELEGP SRVLLTGERT ALNFVQTLSG VASKVRHYVE 
    0141 LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS DAFLIKENHI IASGSVRQAV EKASWLHPDA 
    0211 PVEVEVENLE ELDEALKAGA DIIMLDNFET EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV 
    0281 GALTKHVQAL DLSMRFR
    
    
    Nucleotide
    FASTA format

    View sequence out neighbor 100bp
    -100                                             gttctaacaa catgcaggat ctccttatat 
    -070 gtggtgctaa tacccggttc agagtagcat gtttctacct tatgattcgt tagctatctg gagttttaac 
    0001 atgccgcctc gccgctataa ccctgacacc cgacgtgacg agctgctgga acgcattaat ctcgatatcc 
    0071 ccggcgcggt ggcccaggcg ctgcgggaag atttaggcgg aacagtcgat gccaacaatg atattacggc 
    0141 aaaactttta ccggaaaatt ctcgctctca tgccacggtg atcacccgcg agaatggcgt cttttgcggc 
    0211 aaacgctggg ttgaagaggt gtttattcaa ctggcaggcg acgatgtcac cataatctgg catgtggatg 
    0281 acggcgatgt catcaatgcc aatcaatcct tgttcgaact tgaaggccca tcccgcgtgc tgttaacggg 
    0351 cgaacgcact gcgcttaatt ttgtgcaaac cctttcagga gttgccagta aggtacgcca ctatgtcgaa 
    0421 ttgctggaag gcaccaacac gcagttgttg gatacgcgca aaaccttacc cggcctgcgt tcagctctga 
    0491 aatacgcggt actttgcggc ggcggagcga atcaccgtct ggggctttct gatgccttcc tgatcaaaga 
    0561 aaaccatatt attgcctccg gctcagtgcg ccaggcggtc gaaaaagcgt cctggctgca cccggatgcg 
    0631 ccagtagaag tcgaagtaga gaatctggaa gaacttgatg aagccctgaa agcaggagcc gatatcatca 
    0701 tgctggataa cttcgaaaca gaacagatgc gcgaagccgt caaacgcacc aacggcaagg cgctactgga 
    0771 agtgtctggc aacgtcactg acaaaacact gcgtgaattt gccgaaacgg gcgtggactt tatctccgtc 
    0841 ggtgcgctaa ctaaacacgt acaagcactc gacctttcaa tgcgttttcg ctaatagttg acagatttat 
    0911 ccgctccatc gcgggcggat aatctcccct tccccaactt tcttcgtaac gcctcgcaaa tttcttgtct 
    0981 ttcgctgcaa cgaa