|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR31
(D)
,
OCR31-3
(D)
,
OCR31-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yacL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yacL
Search strains by all related name:
yacL b0119 ECK0118 JW0115
|
General information (Go to Linear View: )
|
|
Gene Name
|
yacL
|
|
Alternative name
|
b0119,ECK0118,JW0115
|
|
Location, Length
|
134,388 - 134,750
(
+
)
;
2.90
min
;
363
(bp) ,
120
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
yacL
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081687
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YACL_ECOLI
(
P45567
;
P75653; Q8X955
)
|
|
- Protein name
|
Hypothetical UPF0231 protein yacL.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yacL; OrderedLocusNames=b0119, z0129, ECs0123;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yacL
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0231 protein yacL
|
|
PSI-BLAST
|
UPF0231 protein yacL
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein SSON_0127 [Shigella sonnei Ss046]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MDYEFLRDIT GVVKVRMSMG HEVVGHWFNE EVKENLALLD EVEQAAHALK GSERSWQRAG HEYTLWMDGE
0071 EVMVRANQLE FAGDEMEEGM NYYDEESLSL CGVEDFLQVV AAYRNFVQQK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AACCATCGCC GTTCCGCTGT TTTTCTCCGG
-070 TAAGGCTGCG ATAATTACAT CAATGGCGCA ATGCGATTTC GGTGCATTGC CGGGAGCAGA GGAACACACT
0001 atggattacg aatttctgcg cgatattacc ggagtggtaa aggtgcgtat gtccatgggg catgaagtgg
0071 tcgggcactg gtttaatgaa gaggtgaaag aaaacctggc cttgcttgat gaagtggaac aagcagcgca
0141 cgcactgaaa ggtagcgaac ggtcctggca acgggcaggg catgaataca ccctgtggat ggacggtgaa
0211 gaggtgatgg ttcgcgccaa tcaactggaa ttcgctggcg atgaaatgga agaggggatg aactactacg
0281 acgaagaaag cctgtcgcta tgcggcgttg aggattttct gcaggtcgtg gcggcttacc gcaatttcgt
0351 gcagcagaag taaATAAATC TGGCGGAGCC TGGGAGCTCC GCCAGAGCCG TTAAACAGCT GGCATATTGC
0421 GCCCGTAATA AATCTCGCGC ATTTCTTTCC ACAGCGCAGC GGT
|
