PEC (Profiling of E.coli Chromosome)

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Gene Report : thiQ

PEC Original Annotations
Essentiality
Class	non-essential
References (PMID)
Deletion	DE(araA-leu)7697 , OCR30 (D)
Related gene (W3110 PEC)
Gene Search	Search MG1655 PEC by gene name: thiQ
Related strains
Strains Search	Search strains by gene name: thiQ Search strains by all related name: thiQ b0066 ECK0067 JW0065 sfuC yabJ

General information (Go to Linear View:)
Gene Name		thiQ
Alternative name		b0066,ECK0067,JW0065,sfuC,yabJ
Location, Length		72,229 - 72,927 ( - ) ; 1.56 min ; 699 (bp) , 232 (aa)
Product		thiamin transporter subunit
Operon Name		sgrR-sroA-tbpA-thiPQ
Note		putative ATP-binding component of a transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009228 - thiamin biosynthetic process
Function		putative transport; Not classified
Gene Ontology		GO:0000166 ; nucleotide binding ( thiQ ) GO:0005524 ; ATP binding ( thiQ ) GO:0005886 ; plasma membrane ( thiQ ) GO:0006810 ; transport ( thiQ ) GO:0009276 ; 1-2nm peptidoglycan-based cell wall ( thiQ ) GO:0015888 ; thiamin transport ( thiQ ) GO:0016020 ; membrane ( thiQ ) GO:0016787 ; hydrolase activity ( thiQ ) GO:0016887 ; ATPase activity ( thiQ ) GO:0017111 ; nucleoside-triphosphatase activity ( thiQ ) GO:0042626 ; ATPase activity, coupled to transmembrane movement of substances ( thiQ ) GO:0048502 ; thiamin-transporting ATPase activity ( thiQ )
PID		1786253
EC number (KEGG Pathway)
SWISS-PROT ( Show details [ 2 more] )
Entry name(Acc.no)		THIQ_ECOLI ( P31548 ; P75635 )
- Protein name		Thiamine transport ATP-binding protein thiQ.
- Synonyms
- Gene name		Name=thiQ; OrderedLocusNames=b0066;

	Linear View (Whole Mode)

		View Location
		72.229 – 97.229 (KBP)

Homology Analysis
BLAST
Bacteria
GTOP	thiQ ( homologous genes of other bacterias )
PDB (database updated : 2007.02.20 )
PSI-BLAST	Chain A, Structure Of The Atpase Subunit Cysa Of The Putative Sulfate Atp-Binding Cassette (Abc) Transporter From Alicyclobacillus Acidocaldarius
SWISS-PROT (database updated : 2007.02.20 )
BLAST	Thiamine import ATP-binding protein thiQ
PSI-BLAST	Phosphate import ATP-binding protein pstB
nr (database updated : 2007.02.20 )
BLAST	thiamin transporter subunit [Escherichia coli K12]
Pfam 28.0 (database updated : 2015-05 )
Pfam
PROSITE
PROSITE	GLYCOSAMINOGLYCAN PKC_PHOSPHO_SITE CK2_PHOSPHO_SITE MYRISTYL ATP_GTP_A ABC_TRANSPORTER

Other Cross-Reference
COG	COG3840H
EcoCyc	thiQ

Sequences

Amino acid
FASTA format

0001 MLKLTDITWL YHHLPMRFSL TVERGEQVAI LGPSGAGKST LLNLIAGFLT PASGSLTIDG VDHTTMPPSR 
0071 RPVSMLFQEN NLFSHLTVAQ NIGLGLNPGL KLNAVQQGKM HAIARQMGID NLMARLPGEL SGGQRQRVAL 
0141 ARCLVREQPI LLLDEPFSAL DPALRQEMLT LVSTSCQQQK MTLLMVSHSV EDAARIATRS VVVADGRIAW 
0211 QGMTNELLSG KASASALLGI TG

Nucleotide
FASTA format

View sequence out neighbor 100bp

-100                                             attggctcct atcgcagcca ggacggtgcg 
-070 gtcaccgcgt taattctgct gctgctctgt tttctgctgt ttaccgtgat tgaaaaacta ccggggcgaa 
0001 atgttaaaac tgactgatat cacctggctt taccaccatt tgccgatgcg ttttagctta acggtggaac 
0071 gcggcgagca ggtggcgatc ctcgggccaa gcggcgcggg taaaagtacc ctgctgaatt tgatcgccgg 
0141 ttttctgacg ccagccagcg gttcgctgac tatcgatggc gtagatcaca caactatgcc gccgtcacgc 
0211 cgtccggtgt cgatgctgtt tcaggagaac aacctgttca gccacctgac ggtcgcacag aacatcgggc 
0281 tggggctaaa tccgggattg aaactgaacg cggtacagca ggggaaaatg cacgctatcg cccgccagat 
0351 ggggattgat aatttaatgg cgcggttacc gggcgagctt tccggcggtc agcgacagcg agtggcgtta 
0421 gcgcgttgtc tggtacgcga acagccgatt ttattgctcg atgaaccgtt ctctgcgctc gatccggcgt 
0491 tacgtcagga gatgttgacg ctggtgagca cgagctgcca gcagcaaaaa atgacgctat tgatggtgtc 
0561 gcacagcgtg gaagatgcgg cgcggatcgc cacgcgctcg gtagtagtcg ccgacgggcg catcgcctgg 
0631 cagggtatga ccaatgagtt gttgagcggt aaggcgagtg cttcggcact attggggatt acgggttagt 
0701 atgcactgtc ggatgcggcg tgaacgcctt atccgaccta cgggtagtgc gttttgtagg cctgataaga 
0771 cgcggcaagc gtcgcatcag gcaacccgc