National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : cDNA

• > Contig Detail

cDNA - Contig Detail

Wh_VHS_all.Contig990

Length

630 bp

Tissue

Shoot with heat shock treatment

Clones

4 Clones [Download: CSV , FASTA ]

whvh10c21 whvh2f07 whvh2m13 whvh17g14

Assemble Result

Assemble Viewer

Homology (BLAST)

Top Hit

Os08g0502700 [Oryza sativa (japonica cultivar-group)] >gi|42407771|dbj|BAD08917.1| putative aminotransferase [Oryza sativa Japonica Group] >gi|42408130|dbj|BAD09269.1| putative aminotransferase [Oryza sativa Japonica Group] >gi|113624139|dbj|BAF24084.1| Os08g0502700 [Oryza sativa (japonica cultivar-group)] >gi|125562079|gb|EAZ07527.1| hypothetical protein OsI_29783 [Oryza sativa Indica Group] >gi|125603927|gb|EAZ43252.1| hypothetical protein OsJ_026735 [Oryza sativa (japonica cultivar-group)] >gi|215693999|dbj|BAG89198.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215694380|dbj|BAG89373.1| unnamed protein product [Oryza sativa Japonica Group]

Score

842

Evalue

1.39796e-88

Total Hit Count

500

>Wh_VHS_all.Contig990
GGCTCTTCCCTGGTCACCGGCGAGAAAAAGCAAGATGGACTACATGAATG
GGCCAGGCCGGAACCACCTGTTCGTCCCTGGGCCGGTGAACATCCCGGAC
CAGGTGATCCGCGCCATGAGCCGGCAGAACGAGGACTACCGCTCGCCGGC
GATCCCTGCCCTCACCAAGACCCTGCTGGAGGACGTGAAGAAGATCTTCA
AGACCACCACCGGCACCCCCTTCCTCTTCCCCACCACCGGCACCGGCGCC
TGGGAGAGCGCGCTCACCAACACGCTCTCCCCGGGGGACCGGATCGTGTC
CTTCTCGCTGGGGCAGTTCAGCCTGCTGTGGATCGACCAGCAGCAGCGCC
TCGGCTTCAGCGTGGACGTGGTGGAGTCCGACTGGGGCTACGGCGCCGAC
CTCGGCGCCCTCGAGTCCAAGCTCCGCACTGACTCGCAGCACACCATCAA
GGCCATCTGCATCGTCCACAACGAGACCGCCACCGGCGTCACCAACGACC
TCCACGCCGTCCGCAAGCTCCTCGATGCGTACCGGCACCCGGCGCTGCTG
CTGGTGGACGGGGTGTCGTCCATCTGCGCGCTGGACTTCCGCATGGACGA
GTGGGGCGTGGACGTGGCGCTGACGGGGTC