National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : cDNA

• > Contig Detail

cDNA - Contig Detail

Wh_V4816_all.Contig97

Length

1166 bp

Tissue

Shoot grown under cold condition for 16days

Clones

2 Clones [Download: CSV , FASTA ]

whv16n2f18 rwhv16n2f18

Assemble Result

Assemble Viewer

Homology (BLAST)

Top Hit

putative 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase [Oryza sativa Japonica Group] >gi|56785242|dbj|BAD82130.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase [Oryza sativa Japonica Group] >gi|125572904|gb|EAZ14419.1| hypothetical protein OsJ_004244 [Oryza sativa (japonica cultivar-group)] >gi|218189493|gb|EEC71920.1| hypothetical protein OsI_04715 [Oryza sativa Indica Group]

Score

1178

Evalue

4.61533e-127

Total Hit Count

500

>Wh_V4816_all.Contig97
CAGCGCCTCCGGCATGGAGCTCCGCCTCTGCCTCCACCTCCACCTCCACC
TCCACCTCCACTCCCACGCGCGGCCCCCTTCCGCCCCGACGCCGCCTCCA
TGCCCCGCGGCCGTACTGCTTCCCGTCCGCCGCCTGCGGATTGGTGGGAG
CTGCGGGGTTGCTCCGCGGCGGAGCACGAGGCGTTCGCATTCAGCCATCT
GCGCTGCCGAACCAGACGGCGCGCAGGGCGGGGAGGCTGTCAAGGAGAGG
AGCGTCTCGGTGGTCCTCTTGTCCGGAGGGCAAGGAAAGAGAATGGGGGC
CAATATGCCCAAGCAGTATCTACCATTACTGGGAGTACCAATTGCACTGC
ACAGTTTAAGGACATTCTGTGGAATGAAGGAAGTGAAAGAAGTCGTAGTG
GTGTGCGATCCGTCCTACAAAAATGTATTTGAAGGTTTTGTTGAAAACCT
GCAAATACCTATGAAATTTACAACCCCGGGAAAAGAGAGACAAGACTCTG
TTTTTAATGGACTTCAGGAAATTGATGGAGATTCAGAACTTGTTTGTGTC
CATGATTCTGCAAGACCCTTGGTATCCTCTGAAGATGTAAAAAAGGTCTT
GGAAGATGCTGCCGTGCATGGAGCAGCTGTTCTTGGTGTGCCTGTCAAAG
CTACTATAAAGGAGGCCAACAGCGATTCTTTCGTCGTAAAAACCCTCGAT
AGGAAAACCCTCTGGGAGATGCAAACTCCACAGGTGATGAAACCTAATTT
GCTCAAAGATGGTTTCGAGCTAGTTAAGAGGGATGGCCTTGAGGTCACTG
ATGATGTTTCCATCGTAGAATACTTGAAACATCCTGTTTATATCACTGAG
GGCTCTTATACAAACATCAAGGTGACTACTCCTGATGACATGCTCTTAGC
TGAGCGTTTGATGAACGATAAATAGGGCCAATATTAACAATGTTTACTTC
ATTTGAGAGGCACCTGTATGAATTTGTCAGTACGACATTCCATTGCCTTT
CCACAGTTTTGGCCTCTTGGGAACTAGAAAAATAAACATGTACTCCCTCC
GTCCCAAAATATAATAATGTTTTTAACACTAGCATCATGTCAAAAACGTT
CTTATATTCTGGGACAGAGGGAGTAGCTCATACACGAGATAGATAACCTG
TACGTAACATTCTTTC