National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : cDNA

• > Contig Detail

cDNA - Contig Detail

Wh_V4816_all.Contig16

Length

1117 bp

Tissue

Shoot grown under cold condition for 16days

Clones

2 Clones [Download: CSV , FASTA ]

whv16n12a23 rwhv16n12a23

Assemble Result

Assemble Viewer

Homology (BLAST)

Top Hit

Os01g0963300 [Oryza sativa (japonica cultivar-group)] >gi|57899182|dbj|BAD87234.1| putative syntaxin 6 [Oryza sativa Japonica Group] >gi|113535016|dbj|BAF07399.1| Os01g0963300 [Oryza sativa (japonica cultivar-group)] >gi|215695277|dbj|BAG90468.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218189790|gb|EEC72217.1| hypothetical protein OsI_05319 [Oryza sativa Indica Group]

Score

143

Evalue

4.51482e-07

Total Hit Count

>Wh_V4816_all.Contig16
CTCGTCGCAGCCTACGGCGCCCGATGCCGCCCGATTCCTCCACCCTCCGA
CGGCGCCTGATGCCTTCTCCTCCGCTCCATCCTCCACTTGGACTAGATCT
GGCGCGCACGTCCCACACATCGACCGTGCCCTCCCACCCACACATCGCCA
CCACCACCCACCGTCCCGTCTGACCTTGCCGCCTCCACCCATGCCGCATC
TGACCTCGTCTCCGGCCGCCGCTCCCGCTCTCCCCCCCCCTCACACACAC
ACACCAGGGCTTCGATCTGGACCTCTGTCTGCACGAGGGGACGTCTGCGC
CTCGTCCTCGTCCCACCTCAGGCGCCAGATCGAGCCGGACTCGTGTCGTC
ATCAAGAGCCGACCTCGACGGAGATGAGAGGAACCCTTCTTCCTCCGTCT
TCCTTCGACCTCGACCTCGGCATGTTGACCTCGCTCCATAACATCTCGGT
GAACCACTACTGGATGTGGCGTCGACTAAGCACTGCACATGGCTTGCTCG
CCGGCACGCGCGTGCGTGCTTCGATGCGCGGCGCTTCGTCGAGCTGGACG
GACCGCGGCAATCGCTGGAGCCAGAGCTGGAGGAGGCGACGAGATGCTGC
TGCTGCGGCTGTGTCCTCGGAGGCAGTTGCTGCCCCTCGCCGACCTCACC
AACATCCGGCGTCCGCCATGAGCTCCCCGCAGGACCCCTTCTACATCGTC
CGGGAGGAGATCCAGGGCTCGATGGGTAAGCTGCAGACTACGTTCCATCG
CTGGAAGCAAGTTTCTTCAAACCTGATTACTTTGTCATCAGGCTGGCTGA
TTGCATCCAGCTCAAATTGTTCCACATTTCTAGCTTAAGGGTTCCACTTG
CACATGATGGCCCCCAACTCCTTATGGCAAGCAGTTTCTCCAGCTGACAA
CAAGGTTAATTATTAAGCATACGAGAACATATTCATGAAAGTTCTGTTAG
TAGGTGGATGGCTTCTAGTTCTAAATGATTTGGAAGCTGGGAATCTGGGG
AATGCAAAGTTGAAGAGACCTGGAGTATCTATACTGTGATTGCCATTGTA
TATGTGTTATATGATGATGTAACACAATGATTCTGCTATTGTATCTTTGT
TGTATGATGTATCAAAC