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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8492  (registered. 2012)
Contig Information
Length 1345 bp
Clones alternative view 208 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 7
Wh_r Root 5
Wh_yd Spikelet at late flowering 5
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 9
Wh_KMP Shoot grown under continuous light 4
Wh_MS Seed DPA5 of DT3DL CS wheat 7
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 3
Wh_RDr Root of dessiccated seed 7
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 5
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XA Root 14
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 15
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 6
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|22607|emb|CAA44259.1|| 14-3-3 protein homologue [Hordeum vulgare subsp. vulgare]
Score 508
Evalue 7.00E-142
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8492 
TTTTTTTTTTACGAAAATACATTTCGAATAAAATTAATTTTGTAGATGCTGATATAATTAATTTTATATCAAAATGATCAAACTTTTGACTTAGAAGAAT
CCTACAAGTCAATTATTTGGAGAGGGAAGTAGGACAAGAAAAACTCAGGGGGGTGCTTGACGCCAAGTATGATCAATCATCAACAAGCCATGAAAATTGC
TAATACAGCAATACTAATAATGTGCTGCAATACAGGAAATAGTTTGAAATCTGCTAATGAACTAAGAAGCGACGATGTCCACATGACCGCCCTCATGACT
GTAGTCCACTAGGTACTTCAGCTCGACACGCTTCGCATAGCACCATCCTACCACATCTTATGATTCACATAGTGCAACTGACCCTAGTACATCTTATGAT
CCGAATGATACAGGTAGCTGCGTAAATGGACTCAGAAATAAACTTGGGCACGCTCAAGGGCCGGCCAATCAGTGCCCCTCTCCCTCTGGCTTTGAGGCGG
CTTCCTTGATCTCATCACCACCCTCCTCTGCGTTATCAGAGGTCCAGAGAGTCAAGTTGTCACGAAGAAGTTGCATGATCAAGGTGCTGTCCTTGTAGGA
TTCCTCGCCGAGGGAGTCCAGCTCAGCAATAGCTTCATCAAATGCCTGCTTGGCAAGGTTGCAAGCACGGTCTGGAGAGTTCAGGATCTCATAGTAGAAC
ACTGAGAAGTTGAGTGCAAGTCCAAGCCTTATCGGGTGGGTGGTAGGCAAGTCAGCAAGCGCGATGTCCTGGGCTGACTTGTATGCTACAAGAGTGTTCT
CAGCTGCTTCTTTCCTCTCAGCACCCGCCTTGAACTCCGCAAGGTACCTGTGGTAGTCACCCTTCATTTTCAGATAGAACACCTTGGACTCTGCTGCAGT
GGCAGAGGGGACAAGGTGGGAGTCCAGAAGCTTGAGGATGCCATCACAGATCTTGCTGAGCTCGGTTTCAATCCTGGTACGGTACTCCTTGATTGATGCG
ACATAGGCCTCGTTCCCACGGCTCTCCTCCTTCTGCTCAATGGAGGAGATGATCCTCCAGGAAGCCCTCCGGGCACCAATCACATTCTTGTAAGCCACAG
AGAGCAGGTTGCGCTCCTCAACAGTGAGCTCACCTACATCAGCGGTCTTGGCCACCTTCTCCATGAATTCGACCATTTCCTCATAACGCTCAGCCTGCTC
GGCGAGCTTGGCCATGTACACATTCTCCTCACGGGTTGCCTCAGCGGTAGACATTTTCTCTCTTCTTTGTTGCAAACTAGTTCAGTGCCTTTCCTGTCGC
GCTTCGCTGTTCTCACGGGCTTCGGCTGCGGATCTCGGGTGCGCG
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