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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10519  (registered. 2012)
Contig Information
Length 1574 bp
Clones alternative view 388 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 7
Wh_dL Crown of seedling 11
Wh_e Seed DPA10 6
Wh_f Spike at flowering date 15
Wh_h Spike at heading date 11
Wh_oh Pistil at heading date 8
Wh_r Root 11
Wh_yd Spikelet at late flowering 5
Wh_SH - 2
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 11
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMV Shoot grown with continuous light after cold treatment 7
Wh_MS Seed DPA5 of DT3DL CS wheat 8
Wh_OKCS Seed DPA5 12
Wh_PCDAM Anther at meiosis 5
Wh_RDr Root of dessiccated seed 12
Wh_SHC Shoot grown with cold treatment 15
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 5
Wh_VSCB Liquid cultured tissue 8
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 6
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 10
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_CA 1
WH_SP 16
WH_XA Root 12
WH_XB Root 25
WH_XC Root, treated at 50 microM Al for 6h 35
WH_XD Root, treated at 50 microM Al for 6h 24
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 14
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218191472|gb|EEC73899.1|| hypothetical protein OsI_08713 [Oryza sativa Indica Group]
Score 707
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10519 
TTTTTTTTTTTGGATGTCAAGACCAACAGCATAAACTTGGACCATAATAATCTCAGTAGGATTGGAGGACAATGTATTTAAGGAAAATTGCCCAGTAACG
ATTCAGGGCACATACTCGAACTCAAACTCAACCCCTATGATAGTAAATGTTTTGAGAACGCTGCCGCCAACCTACGACAACCTCTGGAGTTCGATGCCTC
CACCAAAAACGAATGTTGGGAAAATCCACCCTCTACAGAAATTATTGCCTTCCAACGTTAAAAAGATAAAAGTTCGCCAGATCCTTGAAGGGCAGGACTG
GGAACAGACTTCTCTTGTTCGTCATCATTTCTTCCCCTCTAGGCACCGCCTGAGCCGTACTTCTTGCCGAAGAAGAGGATCTGGAGCTGATCGTAGCCGG
AGAGCACACCAGCACCAGCAATGGCACGGAGGATGTTGGCACCAGCACCCTTGAAGAGAGACTTGGCACCCTCCTTCGCCAGGATCTGCTGGAAAGCATC
CAAGGAGCTCTTGTACTTGACAGCCTCTCCGGAGGTCATCATCATCCTTCTGCGGACGGTGTCAATGGGGTAAGATGCAAGACCGGCACCGTTGGTGATC
AACCAACCAAGAGCAAAGCTGGCAAAGAAGTTGTCCTGGAGAGTGCCAGTGAGGAGAACGGGCTTCAGAGAATCATACAGTCCAAAGTACAGACCACGGT
AGACAATGATTCCAACACAAGAGATGTTGAATCCACGGTAAAGCCCAGCAATACCATCTGACTTGAGAGTCTTGCGGTAGACATCAACCAGGCCATTGAA
TTGCCTGTCACCTCCACCCTTGGATGCCTTTGCGTCATTGGCCAGCCTTGTCCTAGCATAGTCCAGGGAGTACACGAAGAAGAGCGAGGAAGCACCAGCA
GCACCACCAGAAGCAAGGTTGCCACCGAACCACTTCCAGTAACCATCCTTGTCCTTCTTGAAGTTGAACATCCTCTTGAAGTAATCCTTGAATGCAAAGT
TCAAAGCCTGAGTTGGGAAGTAACGGATGACGTTAGCAGTGTTTCCTCTCCACAATGAGCCAAAGCCTTCATCCTTGATGGTGCGGCCAAAGCAGTCACC
AATACCCTTGTATGGCTCAGAGAGCCTGCCAGCCTTGATCATCTCATCCTGGTTCTGGATAAGCAGCTTAACACGCTCAATAGGAGCTGCAGCAGTCTTG
GAAACTGCAGCGGACACTCCTCCCATGAGGAAGTCAATTGCAAAGTTCTTGACACCTTTCTTCTCAGGTGGTGCATTGGCAAACAATGGAGAAGATGACA
TCATGGGGACACTGATGCCAAGGTTCTGAGTCATGTAGCAGCTTGTGGTGAAGCGCCTCTCATAGGATGGCACAGAAGGGCAGATGTTGCGAGCACGAAC
ACCCTCAGAGAAGCTGGAGGCAAGGTGGAACTGTCCACCAAACTTCTGCATGACAGACGGGTGGTTAGCACGGTCCGCCATCTCTGACCCTTCGGAAGCG
GAGGCGAGGAAGATGGGGTGGTGGCTCTTCCCGGCTCGGCGGCTCCGCTCCTTCCGGTCTTGCCTCGTGCCGAA
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