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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25321  (registered. 2007)
Contig Information
Length 932 bp
Clones 126 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 11
Wh_KMV Shoot grown with continuous light after cold treatment 15
Wh_OKCS Seed DPA5 2
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 10
Wh_VABA Shoot with ABA treatment 22
Wh_VHS Shoot with heat shock treatment 50
Wh_VWD Shoot grown with dessication 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic; Short=RuBisCO small subunit PWS4.3; Flags: Precursor >gi|170769|gb|AAA34301.1| ribulose-1,5-bisphosphate carboxylase/oxygenase
Score 817
Evalue 2.38027e-85
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25321 
CTGCAGGAATTCGGCCACGAGGCGGCATCCTCCTCTCCTCCAGTTAATAGAATACCATGGCCCCCCGCCGTGATGGCTTCGTCGGCTACCACCGTTGCAC
CCTTCCAGGGGCTCAAGTCCACAGCCGGTCTCCCCGTCAGCCGCCGCTCCAGCGCCAGCCTCGGCAGCGTCAGCAATGGCGGAAGGATCAGGTGCATGCA
GGTGTGGCCAATTGAGGGCATCAAGAAGTTCGAGACCTTGTCTTACTTGCCACCCCTCTCCACGGAAGCCCTCCTGAAGCAGGTCGACTACCTGATCCGC
TCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTTGGCTTCGTCTTCCGTGAGCACAACAGCTCCCCCGGGTACTACGACGGTCGATACTGGACAATGT
GGAAGCTGCCCATGTTTGGGTGCACCGACGCCACACAGGTGCTCAACGAGGTGGAGGAGGTCAAGAAGGAGTACCCTGACGCCTATGTCCGTGTCATCGG
CTTCGACAACCTGCGCCAGGTGCAGTGCGTCAGCTTCATCGCCTTCAGGCCACCGGGTTGCGAGGAGTCCGGCAAGGCCTAAACTACGAGTTGAAACAAT
GGCCTATCTCGTATGAAGGTCTTTTGTGAACTTCACTTTTGTCCACAACTCTGCTGCACGACTCTGCTTTCGGACCGGAGCATACCTTTTGTTCTATATG
ATTTGTGTATGTATGTACGAACATAGGTTCTTGAGCATGCATACGTAATTCCTCATAGGTCTATATGCACCGGCTACACATATGCAAAACCTGTGTAATA
TTTATTATATACAACACGCGGAACCATTGTCTTGCTGTTATTAATTCATGGAAAAGTTTCTTTATTTGGCACTGCAATGGATATGTCTCACAGCTAGTGG
GTGGAAGAATTCAGTATTTGACAAAAAAAAAA
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