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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig13927  (registered. 2007)
Contig Information
Length 947 bp
Clones 4 Clones [Download: TSV  ,  FASTA ]
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os11g0704300 [Oryza sativa (japonica cultivar-group)] >gi|77552708|gb|ABA95505.1| GTP1/OBG family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113645765|dbj|BAF28906.1| Os11g0704300 [Oryza sativa (japonica cultivar-group)] >gi|215740588|dbj|BAG97244.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1018
Evalue 1.19408e-108
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig13927 
CGGCAGAGACGTCCGTCTATCCAAAGGAAATAGACAAGAGGAGGTAGCCCGTTTAAGTACTGGACAGGCAGGAACAGAGTCTTTTCTTGTCTTAGAACTG
AAGAGCATTGCTGATGTTGGCCTTGTTGGTTTGCCTAATGCCGGAAAGAGCACACTTCTGAGTGCTCTCTCTAGGGCTCGCCCAGAGATCGCTGACTATG
CGTTCACCACACTAAGGCCCAATATTGGTAGCCTGACCTACGACGACTACTTGTCAGTGAAAGTTGCTGACATACCTGGTCTTATCAAAGGTGCCCATGA
GAACCGTGGCCTGGGCCATGCCTTCTTGAGGCACATTGAGCGCACCAAAGTTCTGTCCTATGTACTTGACCTGGCAGCAACACTCAACGGTAGGAAGGGT
ATCCCACCATGGGAGCAGCTACGCGATCTGGTCGTGGAGCTAGAGCATTACCAAGAAGGCATGACAAAGCGCCCATCGTTGATTGTCGCAAACAAAATAG
ATCAAGAGGGAGCTGAAGCAATGTATGAAGAACTGAAGAGGAGAGTGCAAGGTGTTCCGATATTTCCAGTGTGTGCCATCTTGCAAGAGGGAATACCTGA
TCTGAGAGTTGGCCTGAGAGACCTTATGGATGCCTCGGATCCGCAAGGTGTCGATTTGAGCAAAATTATTGTAGGCTAAAAAGGCTTTGCCCCTCGTTGG
AGAAGAATTGTTCTCCGATTCTTTCCCCTTGAGCACTGTCTGCTTGCAGATGCACTGTATATCCGTGTTGCAAAAATTGCTCTAATTTTCTGTGTTGCAG
AATAGATCATCCATTGTTTTAGAAAATTCCAGTGTAATAATAACGAAGGGTAACCCAGTATGTATGCTTTGGTCTTTCATAGGAACAGCAATGCGTACTA
CCAAAAAGGTTCATTCAAGTGCTATTTCTAGTGTCCTAAATATTACG
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