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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25410  (registered. 2007)
Contig Information
Length 1061 bp
Clones 330 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 8
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMP Shoot grown under continuous light 17
Wh_KMV Shoot grown with continuous light after cold treatment 32
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 11
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 39
Wh_V4816 Shoot grown under cold condition for 16days 45
Wh_V483 Shoot grown under cold condition for 3days 23
Wh_VABA Shoot with ABA treatment 52
Wh_VHS Shoot with heat shock treatment 15
Wh_VWD Shoot grown with dessication 80
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit lipid transfer protein precursor [Triticum aestivum] >gi|54111986|gb|AAV28706.1| lipid transfer protein [Triticum aestivum] >gi|84617225|emb|CAH69208.1| type 1 non specific lipid transfer protein precursor [Triticum aestivum]
Score 466
Evalue 1.45948e-44
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25410 
TTTTTTTTTGTTAACCGAATAGAGGTAGATTAATTTATAATCCATATATGATAAGCGTACATCGCTACAAAGTACAACAAACTCCCGCTGTCTGCTCAAA
GGGAGTGAACGAACAATCAAACGCTGATACAAAATAGATACAACAGCTGGCCAGCTATGCAAAGCTGGCTCGATGTACGTACTCCTATCTCTCACATGGA
GATCATATCAGAGCATTTATTCATGTATATGTATATATGTGTGTGTGAGACCTCAACGTACTCAGCATCAATCGCTGGAACTATAATCGGCGATGATGGC
GGCCAGAAATCGATCAGTGGATCTTAGAGCAGTCCACGGATGCGCTGATCGTGTAGGGGACGCTGACGCCGCACTTGGAGGGAATGCCTGCGGCCTTGTT
GGGGTTGAGCCCTCCGGCAACACTCTTGAGGCACCTGCATGTAGCTTGCTTGTCGGCGGTGCTCCGCGCTAAGCCGGCCAATTTCCTGACGCCGCTGCAG
CAGGCCCCAGACGGGCTGGTCCCGCTGCCCTTCGCATAGGCGACGCAGGGGGTCAAGGCAGAGCTCACCTGGCCGCAGCTGATGGCCGCGTCGGAGGCTG
CGAGGATCATTGCCGCCACCAGGGCGACCAGCACGAGCTTAGTAGCTGCAGTGCGAGCCATCTCGACCGAGTTAGCTGTAGTTGTGGACCTTGTGGTGGT
GGGCTAGCTCACGGAGAGAGGGTGGGATAGCTAGATTTGCCAGATTTCCTAAATCTATACAATTAGGAACCCCACATTAGCGGCGGGTACAGTAGCTTGA
CCAGGTACGACTCCCAACTGCTGAACGTTTACATCATGAAATGGCTGTCTGCTCTTCCGTCTATCTGTTCACTTATTACTCATCTAAGTCGGTGTCAACC
TGTTGGTGGCCTTTGCCAGTCGGCAGCAATCTTCTCCTTAGCAAGAACTGGACCAGTGATACGGCCACGACCAGAGCTATTTCCACATGGTCTGATGTGC
TGATCTTGACACAGAGCCGGCCTAGATTTCTGCTGTTTACGTTTGCGCTGACCGATAATTT
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