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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25364  (registered. 2007)
Contig Information
Length 962 bp
Clones 170 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 10
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 9
Wh_KMP Shoot grown under continuous light 13
Wh_KMV Shoot grown with continuous light after cold treatment 14
Wh_MS Seed DPA5 of DT3DL CS wheat 15
Wh_OKCS Seed DPA5 14
Wh_PCDAM Anther at meiosis 9
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 14
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 8
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 17
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 14
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit cyclophilin A-1 [Triticum aestivum] >gi|13925737|gb|AAK49428.1|AF262984_1 cyclophilin A-3 [Triticum aestivum] >gi|156193317|gb|ABU56010.1| cyclophilin 5 [Dasypyrum villosum]
Score 843
Evalue 2.40626e-88
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25364 
TTTTTTTTTTAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAGACACAGGAAGATAACCAAGGCGGCCGGACAGAGATCCAGCAGCC
CAAAGAGTCCACCTAAAACCCTCCTAAACCAACCACGGAGATCTCATCGGACGGACCAGGGGAAGACACGACACGACACACGACTCTCTTATTTAGATCG
ACGACACGACACGGGACACACGGGGCGGCGACGACGACGGCGAAAGGCGACCCGCGCGCGGGCGGATCTAGAGCTGGCCGCAGTCGGCGATGACCACCTG
CTTGGAGCAGGTGCCGCTGCGGGAGCCCACCTTCTCGATGTTCTTGACGACGTCCATGCCCTCGACGACCTCGCCGAAGACCACGTGCTTGCCGTCGAGC
CAATTGCAGGGGACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCCGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGCTTGTGGACGA
ACTTCTCGTCGGCGAACTTCTCGCCGTAGATGGACTCGCCGCCGGTGCCGTTGCCCCGGGTGAAGTCGCCGCCCTGGCACATGAAGTCGGGGATCACGCG
GTGGAAGGCGCTGCCCTTGTAGTGCAGCGGCTTGCCGCTCTTGCCGACGCCCTTCTCGCCGGTGCACAGCGCGCGGAAGTTCTCCACCGTCCGCGGCACC
GCGTCCTTGTACAGCTCCATCACGATGCGCCCGGCCGGCGCGCCGCCGACGGTCATGTCGAAGAACACCCTCGGGTTGGCCATCTCGCTCGCCGGGATCG
GGGATGAGGGCTAGGGTTTTGAGATGGGGATTTCTGTGGGGATTGGGATTACCTTTCGCGTACTTTGAAGATTTGGGATACGAGTGTTGATTTGTCGCAG
CCAACAACTGGAGAAGGTCATGAATCTTGGCGACATCTTTCTACTTTATATGGACATCATGG
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