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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24161  (registered. 2007)
Contig Information
Length 1121 bp
Clones 25 Clones [Download: TSV  ,  FASTA ]
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VABA Shoot with ABA treatment 9
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0359000 [Oryza sativa (japonica cultivar-group)] >gi|38637525|dbj|BAD03778.1| unknown protein [Oryza sativa Japonica Group] >gi|113623596|dbj|BAF23541.1| Os08g0359000 [Oryza sativa (japonica cultivar-group)] >gi|215694795|dbj|BAG89986.1| unnamed protein product [Oryza sativa Japonica Group]
Score 822
Evalue 8.35463e-86
Total Hit Count 77
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24161 
CCATGCTGGCCAATCAAGTCAATTTACATCTTTATTACAATAGCCTTTTTTGTATGCTTTGCATGGAACATACGATGCTAGATTTGGAACTACATACAAA
GCTCAAAAGCAAAATTATATACTGAGTATATTACAATAATAACGTTATATATGCAAATTAGTGGGGAAAAGAAATAAATATCATTTTGTTGTATATTAGC
AGATAATAGGATTGCAAACGCTGTCACTCTTCCTCTGTGGTCTCCGAGATAAGACGCACTTCATATAGGTCGTCACCACCTTTTCCAATTTCAGCCTTAA
TTCCAGGACCGAAAAAGGAGGTGAATTTTGCCTGCCTCTTCTCAAAATCTGATAGCTCCAACGATTTGGCTTCGAATTCCAGTACTAAACAGTATTTCCC
ATCATCAGTTACTTCTTGAATCTTTTGTAATATAGGTGCACTACGTCTTGGAATGCCGCCACCCAAACCATATTGAAAGATCCGCTTTAGCGCTTCATCG
AGATGCTGCTCATCACCATATCTATAACGTGTAACATCACTCCTGACCTGCTTGAGGATAGGGGTAGCACACTTCTCTCTTAGAGCGAAAGCATCAGAGT
AGGTTATGCAGGGCACTGGTTTCAGTTCAGCATACTTTAAGGCCATGCCTATGATTGTGAGAGGAAATCCGTAGGTTAGCATCAGAGCAGACCACTCCGA
ACCAGGGAGAAGATTGAAATACGCCCCAAATCCATACGACAAGAGGGAGCCACCTATCCCTAGTCCAATCACGCCAAAAGACACCTTGGCGAGGGTGAAC
TCATCGTCGGGGATGACGGCCTTGTCGTCGGCTGCTCCGGACGATGACGCGGGTGCGGCAGGAGGCGAAGAATCCGCAGCTCGGACCAGCGCACCGGTGC
GACTCGGGCGGCATGGCATAAGGAATTCATTTCTCGCCAGGCGGCGGGAGGGGGATGGCGCCGGGAGGGCAGCAAGAGCCCGGAGTGAGTTTGCGGTGCA
CTGCACAGACATGTCTCTCGCCGCACGTCGCGGCACAGCCACTAGCGTGTAAATCAACCTTGAGGATTTATCCTTGGAAGTGAGTGTTTGTTCCCCGGGA
ATTTCAGTGAACAGAAAGATA
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