Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22409  (registered. 2007)
Contig Information
Length 934 bp
Clones 12 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0831100 [Oryza sativa (japonica cultivar-group)] >gi|28372668|gb|AAO39852.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|31249739|gb|AAP46231.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|108711909|gb|ABF99704.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|113550262|dbj|BAF13705.1| Os03g0831100 [Oryza sativa (japonica cultivar-group)] >gi|218194029|gb|EEC76456.1| hypothetical protein OsI_14178 [Oryza sativa Indica Group]
Score 846
Evalue 1.03835e-88
Total Hit Count 130
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22409 
TCACACGAATATATCGCAGCAAACCTCCCCAGTAACAGGTCAAGTATTAACCTAAACCCTTAACGACTGTATGTATTTCGAGTCCATTGGTATCCAGTGC
CAAAATTGAACATACACCTCGAGTAGGATGACCACGGATGTATGTATTACACTCTTTCATCCACAACAGGCAAGCACGGACGCCGCCTTGGCCTGCTTGT
GTTGCTGGCGATGGCGAGAGGCCCGTCGAGAGAAGACTCACTTCTTCTCCGCTGCTTTATGGTCTGGATTCTTCAGTATGCCACCGTCGATGAGCAGCTG
CACCTCGGATTTCGCAAGATCCTTCACCTTGGAATCCGGAGATTCCAGATAGGCAGCCACCACCTTGGAGCTGAATCCATCTGCAAATGACTTGCACTTC
CCTTTGAGGGCTTTTTTCCATAGGGTAGCGGCAAACTCAGGGCAATCAAGTATCATCTTTCTGATTACGCGGCTCGAGTGGTAGTTATCAAAGGCGTGCT
CAACATCTTCTGTCCTCGGGCGTGCTGCGTCAGAAGCTATAGCATTGTGAAGCACGTGGACCCTGTCGGTGACCCCCTCCAAGACATTATTTTTTCCACC
TACAGCAACCTCGTATAATACATCTTTGCCGAAGTTTGTTCTAAGTAACTCTCCAACATTTTCAATGCAAGTCTCGATGAGAACCTCAAAAAGCTCGCTT
TTCACCAACAGTTCTTGCCGCCGTTTAAACGGGTCCTTCTTGCTATCAGATGCAACCAGTGTGTCTTCTGAACCCCCATGTTCTTTGTCAGCTACATCAT
CCAACTTACTATCCAAGTTAACTTTAGTAGCACTCTCTGATGCCTCATCCTTTGAAACAAGGGAAGGCACACTGTACTTCAGACAATTCAAATCAGTCGG
AGTCAGATAACGTGAGCAAAAGTGGGGTGAAGTA
page-top