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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig2430
Contig Information
Length 2164 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 8 Clones [Download: CSV  ,  FASTA ]
whkv10f23    whkv3l06    whkv8o19    whkv15c02    rwhkv10f23    rwhkv3l06    rwhkv8o19    rwhkv15c02   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0276500 [Oryza sativa (japonica cultivar-group)] >gi|108707463|gb|ABF95258.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113548183|dbj|BAF11626.1| Os03g0276500 [Oryza sativa (japonica cultivar-group)] >gi|125585779|gb|EAZ26443.1| hypothetical protein OsJ_009926 [Oryza sativa (japonica cultivar-group)] >gi|215706307|dbj|BAG93163.1| unnamed protein product [Oryza sativa Japonica Group]
Score 3105
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig2430 
TATCATGTTTCATATCAACTTAAACATAAGATGGGGCAATGTATATATGCCCGAACGAAAAACTGCAGAACGATAATAGAATCCACCGTACAATGAGAGA
CACATTATTCAAGCAGAATAGTAGGCGATCTAAATCTATCATTTAGTCGACCTCCTCAATCTTGGGCCCTGGGCCGCTGCTGCCGCCTGCGGCACTGGCC
GGAGCATCCTCATCCATGCCACCAGGCATTTCAGCGCCGGCACCCTGGTACATCTTGGCGATGATGGGGTTGCAAATGCCCTCCAGCTCTTTCATCTTGT
CATCAAACTCTTCAGCCTCGGCAAGCTGGTTGTTGTCGAGCCAGGTGATGGCACCATCAATAGTATCCTCGATCTTCTTCTTGTCGGCCTCTGGGAGCTT
GGAGGCGATCTTATCATCCTTGATGGTGTTACGCATGTTGTAAGCGTAGTTCTCCAGGGCGTTCTTGGAGTCCACCTTCTTCTTGTGCTCCTCGTCCTCA
GCCTTGTACTTCTCGGCCTCCTGCACCATCTTCTCGATGTCCTCCTTGCTCAGCCGCCCCTTGTCGTTGGTAATTGTGATCTTGTTCTTCTGCCCGGTGG
TCTTGTCCTCCGCAGAGACGTTCAGGATACCATTGGCATCAATGTCAAAGCACACGGTGATCTGGGGGACACCCCTGGGCGCCGGTGGGATCCCGGAGAG
CTCGAACTTGCCGAGCAGGTTGTTGTCCTTGGTCCTCGCCCTCTCGCCCTCATATACCTGGATGAGCACGCCGGGCTGGTTGTCAGAGTAGGTGGAGAAG
ACCTGCTCCTTCTTGGTGGGGATTGTCGTGTTCCTTGGGATCAGCACGGTCATGACACCTCCGGCCGTCTCCAGGCCCTGCGAGAGCGGTGTGACGTCAA
GCAGGAGCAAGTCCTGCACCTTCTCGTTGCCCTCGCCAGTGAGGATGGCAGCCTGAACGGCGGCTCCATACGCGACGGCCTCGTCAGGGTTGATGCTCTT
GCAGAGCTCCTTCCCGTTAAAGAAGTCCTGGAGGAGCTGCTGCACACGGGGGATACGTGTGGATCCTCCGACGAGGACAACATCGTGCACGGTGCTCTTG
TCCATCTTGGCGTCCCGGAGGCACTTCTCAACGGGCTCCATGCACTTGCGGAAGAGGTCCATGTTGAGCTCCTCGAACCGGGCGCGGGTGATGGTAGTGT
AGAAGTCGATGCCCTCGAAGAGGGAATCGATCTCGATGGTGGTCTGGGCGGTGGAGGAGAGTGTCCTCTTCGCCCTCTCGCACGCTGTCCTGAGCCGCCG
GAGCGCCCTCGGGTTGCCGCTGATGTCCTTCTTGTTCTTTCTCTTGAATTCCTGCACGAAGTGGTTGACCATCCGGTTGTCGAAGTCCTCGCCTCCCAGG
TGGGTGTCTCCGGCAGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTGAGGAGGGAGACATCGAAGGTACCGCCGCCGAGATCAAAGATGAGCACGT
TCTTCTCGCCGACGCTGGTGGACTTCTTGTCGAGACCATAGGCGATGGCGGCGGCGGTAGGCTCGTTGATGATCCGCATGACGTTGAGGCCAGAGATGAC
GCCTGCATCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCAGGGACGGTGACGACTGCGTTCTTGATGGTTGTACCGAGGTAGGCCTCGGCCGTC
TCCTTCATCTTGTTGAGCACCATGGAGGAGATCTCCTCGGCCGAGAACTGCTTGTCCTCGCCTCTGTACTGTACCCCGATCATCGGCTTGTCAGCGGGAC
CGGGGATCACCTTGAACGGCCACAGCTTGGCGTCGCTCTGGACCGACGAGTCCGAGAAACGCCGGCCGATGAGCCGCTTCGCATCGAAGACGGTGTTGAT
CGGGTTCATGGCGACCTGGTTCTTCGCGGCGTCGCCGATGAGCCGCTCGGTGTCGGTGAAGGCGACATAGGACGGCGTGGTGCGGTTGCCCTGGTCGTTG
GCGATGATCTCCACACGGTCATGCTGCCAGACGCCGACGCAGGAGTAGGTCGTGCCGAGATCGATGCCGATCGCCGGCCCGTCTCCTTTTCCGGCCATGA
TCTCGTCGACTTGTCGAGCGGAAAAAACAACCTCGAAGGGAATTGCGGGATTGGTTGGATTTGG
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