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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25264  (registered. 2007)
Contig Information
Length 2164 bp
Clones 97 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 2
Wh_EMC Dormant seed with cold treatment after water absorption 1
Wh_KMP Shoot grown under continuous light 16
Wh_KMV Shoot grown with continuous light after cold treatment 15
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 5
Wh_SHDr Shoot grown with dessication 19
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 6
Wh_VWD Shoot grown with dessication 15
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit unknown [Zea mays] >gi|195610928|gb|ACG27294.1| abscisic stress ripening protein 2 [Zea mays] >gi|195613174|gb|ACG28417.1| abscisic stress ripening protein 2 [Zea mays] >gi|195621192|gb|ACG32426.1| abscisic stress ripening protein 2 [Zea mays]
Score 191
Evalue 2.90328e-12
Total Hit Count 108
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25264 
AGCAAATTTTGAGATGGATGGGCCACAAAAGTTTCGTGAGGACTTGCATAATAAAGTGAAATTACAAATACAGGGCGCCGGTAGAATTGAAACACACACC
GACACACGACACACACCGACGCATGAGGTGTGGGAGCCACTGCATGAACAGCAACCCCACTTATTCAGGCACGCGGAAGCTTAGCACGCAGAGAAAATCA
CGCACGGGCGAGCACGAGACCGGGCCCGCGTCCCAGCCTCTCTCACTTTATGGAACACACGTAACGTAAGCACACGCACGGCCGGCGGCGAGGCCGGCCA
CCGCACGTCAACGACGATCTAGCCGAAGTGGTGGTGCTTCTTCTCGCCGCTGGCCTCCTTGGCCTCCTTGTGGTCCTGCTTCTTCTCGTGGTGCTCGTGG
AAGACGAAGCCGCCGGCGCCGACGGCTGCGGCGGCGGCCACCTCCTCCTCGATCTTGTGCTTGTGCGCGTGCTCCGGGTCCTTCTTCGCCTCGTGCTTCT
CGTAGAGGGCGAAGGCTCCGGCGGCGGCGGCGCCCATCTCGCCGAGGTGCTCCTTGTGCTTGTGGTGCTTCTCCTCCTTGGTGATCCGCTCGTACTCGCC
CTCGTTGCCGGTGGCGGTCACCACCGTCTCGGTCGAGTACCCGTACATGTCGACGCCGCCGTCAGCGGCGGGCTGGAAGTCCTCGCCCTCCTTCTTGTGG
TGGAACAGGTGGTGGTGGTGCTTCTCCTCCGCCATGGCTGGCTGATCGATTAGCTAGCTAGCACTTGTGTGTGTGTATGTGACAGTAGGACAGCTGCTTC
CTCGTGCCGAATTCGGCACGAGGACAACACAACTCTACAAATGAAATAAGTCATACAAGCATCATATTACAAGCCAGGGGCCTTGAGGGCTCGAATACAA
GAGCTCGATCATAGACGAGTCAGCGAAAGCAACAATATCTGAGTACAGACATAAGTTAAACAAGTTTGCCTTAAGAAGGCTAGCACAAACAGGGATACAG
ATCGAAAGAGGCGCAGGCCTCCTACCTGGGATCCTCCTAAACTACTCCTGGTCGCCGTCAGCGGGCTGCATGTAGTAGTAGGCACCTCCCGAGTAGTAGT
AGTCGTCATCGACAGTGGCGTCTGGCTCCTGGGCTCCATCGTCTGGTCGCAGCAATCAGGTATAGAAAGGGGAAAAAGAGGGAGCAAAGCAACCGTGAGT
ACTCATCCAAAGTACTCGCAAGCAAGGAGCTACACTACATATGTATGCATTGGTATCAAATGGAATAAGGGTATCATATGTGGACTGAACTGCAGAATGC
TGGAATAAGAGGGGGATAGCTAGTCCTTTCGAAGACTACGCTTCTGGTAACCTCCATCTTGCAGCAGGAGAAGAGAGTAGATGGTAAGTTCACCAAGTAG
CATCGCATAGCATAATCCTAACCGATGATCCTCCCCTCGTCGCCCTATGAGAGAGCGATCACCGGTTGTATCTGGCACTTGGAAGAGTGTGTTTTATTAA
GTATCCGGTTCTAGTTGTCATAAGGTCAAGATACAACTCCGGGTCATCCTTTTACCGAGGGACACAACTATTCGAATAGATCAACTTCCCTGCAGGGGTG
CACCACATAACCCAACACGCTCGATCCCATTTGGCCGGACACACTTTTTTGGGTCATGCCCGACCTCGGAAGATCAACACGTCGTAGCCCTACCTAGGCA
CAACAGAGAGGTCAGCACGCCAGTCTAAATCCTATGACACAGGGGTCTGGGCCCATCGCCCTTTGCACACCTGCACTGTTGCGAACGCGGCCGGAAGCAG
ACCTAGCCTAGCAGGCGTTCCAGTCCAATCCCGCGCGCGCCACTCAGTCGCTGACGTCACGAAGGCTTCGGCTGATACCACGACGTTGAGTGCCCATAAC
TGTCCCGCGGGGCACAAGGTGGCCCTTCGACGGCTTAGTAGCTGCAGGGCGGTGCCGGAGCCATGGAAAACGACGGCGACCGTAGCGGACGGAGGTGATG
GCCGACGTGGAGGAGCGGCGTCGATCTCTACATTGAGGCGGTCTTCTACTCGAGGTCGTGGTCGAGGAGGAAGCAGAGGTCGAGGTGACGGCGGACAACG
ACGGGGACGAGCGCGGTGGCTCCCGATCGGGGCGCCCACGGCGAGGAGTGGACGGGGGCGCGAT
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