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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig2456
Contig Information
Length 1558 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 9 Clones [Download: CSV  ,  FASTA ]
whkv10d21    whkv1n09    whkv6b03    whkv18b23    rwhkv10d21    rwhkv1n09    rwhkv6b03    rwhkv14h02    rwhkv18b23   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os11g0414000 [Oryza sativa (japonica cultivar-group)] >gi|77550246|gb|ABA93043.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|113644982|dbj|BAF28123.1| Os11g0414000 [Oryza sativa (japonica cultivar-group)] >gi|169244495|gb|ACA50521.1| eIF4-gamma/eIF5/eIF2-epsilon domain containing protein [Oryza sativa Japonica Group] >gi|215700985|dbj|BAG92409.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1966
Evalue 0
Total Hit Count 421
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig2456 
TTCTTAACGTGCACTCTGCATAAATATCCATGTAACAACTAATACACAACACAAAGTAGGTAACGATCCTTCCAAATCCTGGTACAATAATGTCGAAAAT
GATAGCAGATGACAGCAATGCTCACATCTGAATATAAAATGTTTGTTCAGTAATAAGCAGCAAAAGGATGACCACCGTCTCCGCAAACATGGGGTATAAG
GAAATACTCATTTTAAAGCAACAACCGTGCCTCTTTATTCTTCCTCCTCTGCCTCCTCAAGCCATTTGACGAAAGGCTCCAGAGCTTTCACGAAAGATTG
CCTTCCTTTTTGGTTTGAACCCTTGCGGAACCAAAGAAGTATGGTATCTTCAGCTAGGACATCTTGATCATACAGTGATCTTATAATTTCAGGGAACAGC
TTCATCAACTTAGCATCCTCATAACATTGTGTCTGGACCTTGTATATGAGTTCCAGTTCTAGCTTTCCACTTGTGCAAAATGCATTCATAAGACCAGCCC
AAGCATTCACCTGCCTAAGTGCTGAATTAGAATTTTGCTGCTGGTTCTTTCCAGACCACTGAACAGCCTCCATCAGCACATCCCACAGCATGCGAACAAC
CTCTATATCAGGAAATTTAGCATCTTTAACCTGTTGCTTGACAACCTCAGTTACTTCAGATATTTCAGCTTCTTCATTGATCATAGTGGTCAGAGTTGAC
TTTATCTCCTTGAGCTTAACTTCAAACATTTTCTTGCTATTGTACTCAACAAGGCTAGTCAAACCTTCTTTGGTGAAATGCTCAGACAAAGCCTCAGAGG
TTCTCTTTCCTGATGGAAAAAATTCAAGTAAATTGTCCTCCATTTTGCCTTTCTTTAAAAGTGCAATCAGATCATCCAAACTATTTTCCTTCAGATATTC
CTTGAAGAACTCAGTAATGAATGAAAGCACTATCCCTTTGGCAACAAGATTGTCCTTAAGCAATGGCTGAAAGACAGTTTCAGGTGGCAGACCTGATAAT
TTCTGAGAAAATGCAAGTGCCGTGAAAATGGCAAGTTTCTGTCTCTCATTTTCTTCAAAGAACTCCAAAGACTGGAGAAATTTTCGCATAACATTTTCAA
GACTCTTTATTAAGAAAGGCCTCCTGCGCAATGTTTTCTGAATAAAGAGGACATAAGGTAATATTGCTTCACGTTGTGCTGCACAGTCAATGAGAGAATA
GGGGTGGCGCTCTCCCTCTTCTTCGGGTTTAATCGTACCAGGCTGAGTACGCACACCAATGAAAACAACCTCAAAGAAAGTGTCACCGTAACGTGAGAAG
TTGAGATCTGATGACTCTATACTTTTGGCAACAAGTTCCAGGTCTCCAGCATTATCCAGATAAATCTGGACAATTGCATCAGAGAACGACGAAGGGTCCA
AAGGAGCTGCGATATTCCGCTTGCGGGTCTTAATCCGCTGGCCTCCGAGGGTGGGCTTCTCCTTCGAGCTCATAAACAACGATCTGGCACGGAGAGGAGA
GGTGAAGGAGATCGGGGCTTCGAGGAGGTCGGTTGTGCGGCCGCCGAGGCGATGATGG
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