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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig1637
Contig Information
Length 1305 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whkv10h04    rwhkv10h04   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0332100 [Oryza sativa (japonica cultivar-group)] >gi|53791609|dbj|BAD54740.1| putative neutral invertase [Oryza sativa Japonica Group] >gi|53792532|dbj|BAD53496.1| putative neutral invertase [Oryza sativa Japonica Group] >gi|113532462|dbj|BAF04845.1| Os01g0332100 [Oryza sativa (japonica cultivar-group)] >gi|215767913|dbj|BAH00142.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1420
Evalue 0
Total Hit Count 180
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig1637 
GGATGTGCAAACCGGGATTAAGCTGATCTTGAGTTTGTGTTTGTCTGATGGGTTTGACATGTTCCCCACTTTACTGGTCACAGACGGATCATGCATGATA
GACAGGAGGATGGGGATACACGGGCATCCTCTTGAGATTCAAGCTTTGTTCTATTCTGCTCTAAGATGCTCAAGGGAAATGATTGTTATGAACGAGGGCT
CAAAACACCTCCTCCGAGCCATCAACAACAGGCTCAGTGCATTGTCTTTTCACATTAGGGAGTACTACTGGGTCGATATGAATAAGATAAACGAGATCAT
CAGATACAAGACAGAAGAATACTCACATGATGCAACTAACAAATTTAACATTTATCCCGAGCAAATTCCTTCCTGGCTTGTTGATTGGATTCCTGAGAAA
GGGGGTTATCTTATTGGAAATCTGCAGCCAGCTCACATGGATTTTAGGTTCTTCTCACTTGGCAACCTTTGGGCCATATCTTCATCTCTAACTACTCCAA
CACAAGCCGAGGGAATACTTAGCCTTATTGAAGAGAAATGGGATGATCTTGTAGCAAATATGCCCGTCAAGATCTGTTACCCTGCAATGGAATATGATGA
ATGGCGCATTATTACAGGCAGTGACCCTAAGAACACCCCATGGTCATATCATAATGGTGGATCTTGGCCAACCCTACTGTGGCAGTTTACACTGGCCTGC
ATCAAAATGGGAAGACCAGAGTTGGCCCGCAGGGCCATTGCAGTGGCCGAGGAGAAGCTCTCAGCTGACAAGTGGCCAGAATACTATGACACCCGGTCTG
GAAGATTCATTGGGAAAGCAGTCACGGTCATATCAGACATGGACTATTGCTGGTTTTCTGACCTCCAAGATGTTGCTGGAAAACCCAGAGCTGGCTTCTA
TCCTGACCTGTGATGAGGATCTTGAGCTCCTTGAAGGCTGTGCTTGCTGCCTCTCGAAGAGGACTAGATGCTCACGACGTGCGGCCAAATCAGATATCAT
TGGGTAAAACAGCAGAAACCCTTCTACTCTTGCTCCTCCGCACACAAGTATATGATCGACTGAGAATTAACTGAAGTGGATAAACTCTAGCCATGTACTT
ACAAATCAGATATCATTGGGTAAAACAGCAGAAACCCTTCTACTCTTGCTACTCCGCGCACAAGTATACGATCGACTGAGAATTAACTGAAGTGGATACA
CTCTAGCCATGTATATTATAGGTTTACGTTAGATATCCATCCATTCATTCATTCCCTCAATGTGCGCTCATTCTTTTTTGCTGAGCCGCCATTGATGGGA
ACTGC
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