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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25013  (registered. 2007)
Contig Information
Length 879 bp
Clones 53 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 4
Wh_EM Dormant seed with water absorption 6
Wh_EMC Dormant seed with cold treatment after water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 5
Wh_SHC Shoot grown with cold treatment 4
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os07g0565000 [Oryza sativa (japonica cultivar-group)] >gi|33146750|dbj|BAC79661.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group] >gi|50508298|dbj|BAD30107.1| putative 40S ribosomal protein S11 [Oryza sativa Japonica Group] >gi|113611543|dbj|BAF21921.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)] >gi|215768067|dbj|BAH00296.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218195559|gb|EEC77986.1| hypothetical protein OsI_17372 [Oryza sativa Indica Group]
Score 731
Evalue 2.00466e-75
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25013 
TTTTGAGTAAATATCATATCACATCTGGGCAAACAAATTCACAAGGAATTGAGCAAAAGGACAATCAGGCAGTACAAATTTAAGCGAAACTATTAATGAT
AGATAGATTCCACAAAACATGTTCAGATCAGGACATTCGGTTTGACAGATAACACGGAATCAAATCTCGAAACAGCAGCCTGGTAGATTTCAAGTGCGAA
AAAGTTCTGACTATGAACTACTCATAAATCAGAGTCTGGGCTTAGGCAGCGATGAAAGCCTTCTTCCCGCCTCCGGTGGTTCCAGCTGGAACGACCTTCA
GGACATTGAATCTCACGGTTTTCGACAGGGGCCTGCACTGGCCAATGATGACATGGTCGCCTTCCTTGACACGGAAGCAGGGGGAGATGTGAGCTGGGAT
GTTGGAGTGCCTCTTCTCATACCTCTGATACTTCTTCACAAAATGAAGGTAGTTCCTGCGAACAATGATGGTCCGGTTCATCTTGGCACTGTGGCAGGTT
CCAGCTATGATTCTGCCCCTGATGGCAACAGTTCCAGTGAATGGGCACTTCTTGTCAATGTAGGTACCATCGATCGCTTCCCTTGGGGTCTTGAAACCAA
GGCCAACACTCTTCCAGAAGCGGTTGCCAGCCTTGCCAGGCCTCTTTGCCTTGTCAGCCTTCTTCGTGCTGAGGAAAACCTTTGGCTGCTTGAGGAAAGA
CTTCTCGGTCTGCTCCGCCATGGCTGCGAGGTGGGCTTCGAGGGGCTCGGAGGCGGCGGCGGCGGCGCGGCGCGGGGATGCGGGAGCAAGGCTCTGAGAG
GAGTTGGCTTTTTTTTTTGATANCCTATCANNGATAGGAATTGCTCCTTTATCAAGCTTGCTCAAAAACTAAATANCTA
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