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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig23533  (registered. 2007)
Contig Information
Length 1014 bp
Clones 18 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 4
Wh_EMC Dormant seed with cold treatment after water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase [Oryza sativa]
Score 1126
Evalue 4.01602e-121
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig23533
TTTTTTTTTTGGGAAAATCAAAGCATGTGAATTATGCCACCATTATCATTTTATCATCATCGTCGTTATGGTACAGGTGAATATGTGAGGTAATAACCAA
TACAAAGTGGCCATCATCAGGCCAGGTAACAACTGTTCTTTTATTATCCAGATGAGATGCGACGGTTTATCTAGCTGCCTGTGGATAAGTTCTTTTTCAG
CACACAACAACAACTATCAAGAGATGGCGTCCTCACTTGAGCTTGTGGATGGTTTCCATGTCCACGGCCTCCGCGAGCGTGCCTTTCTCCAAGTGCTCCC
ACCAGCCCATGAGAAAGTTGTCCACCACCAGCCTGAACCAAGGGGACAGCTTCACGCCGCCCTCGCCGGCGTCCGCCTGCTGGATGAGCTCCCGCAGCTG
CTCCCGGCTCACGTACTTCACGTCGGCCACTTCGTCCGGGTTCGGGACCAGCTTCACCTCGCGCACGATGAACAGCAGGTAGTCCAGCTCATGTTCGCCC
CATTTCCCATCAGATGGTGCCTTGTAAAGCATCCGACCGAGAGGGGTGAACTGGTCAACGGGCACATCTTCAGCTGGGATGCCCAGCTCATCGAGGAGCT
TCCTCTGAGCAGCATTTCTGACACCAAGAAAGTTTTCCTGAATAAGCTCAGATTCACGGTACAGAGGATGGCTGCAGCAGGTGTTGGTCCATACTAAAGG
AAACGTAACCTTCGTCGCAGATCTTTGCTGAAGTAGCAGCTCATGTTTTGAGTTGAAAAGGAATACGCTGAATGCCCTGTGGAGCAGGTTCTCAGATTCA
ATCTTCTCCATCAGATGGCAGGTATATTTTGATTCATGGCCGACAACGTTGTCCTGTTCATCTACCAAAATGCATTCGTCGTCGAACATGAGGCGCCTCT
GGACCTCGTCCATCCCGGCGTCGTCGCCCGTGCCGGCCATGTCTCGCGGCGGAGGAGTCCGGGCGGGCGGGCGGCGACCCTGAGAGCTCTGCGGCCGTGC
GCAGTGCGTATGCG
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