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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMI_all.Contig881
Contig Information
Length 541 bp
Tissue Dormant seed with water absorption after breaking
Clones 2 Clones [Download: CSV  ,  FASTA ]
whei1f03    whei1g05   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0621700 [Oryza sativa (japonica cultivar-group)] >gi|75261432|sp|Q6K9N6|SUCB_ORYSJ RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial; AltName: Full=Succinyl-CoA synthetase, beta chain; Short=SCS-beta; Flags: Precursor >gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial precursor [Oryza sativa Japonica Group] >gi|113536994|dbj|BAF09377.1| Os02g0621700 [Oryza sativa (japonica cultivar-group)] >gi|125540340|gb|EAY86735.1| hypothetical protein OsI_08117 [Oryza sativa Indica Group] >gi|125582922|gb|EAZ23853.1| hypothetical protein OsJ_007336 [Oryza sativa (japonica cultivar-group)] >gi|215704850|dbj|BAG94878.1| unnamed protein product [Oryza sativa Japonica Group]
Score 715
Evalue 5.09685e-74
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMI_all.Contig881 
GCATCCCTTCCTTCCTCCACGCCCGTAGGGTTTCCGGATCGGAGGAGCCCAAGCCGCCGCAGCCATGGTTCGCGGATCGCTCGGGAGGTTGGCGTCGCGC
ACCCTCTCCGTCGCCGGCAAATGGCAGCACCAGCAGCTCCGCCGCCTCAACATCCACGAGTACCAGGGCGCGGAGTTGATGGGGAAGTTCGGGATCAACG
TGCCCAAGGGCGCGGTGGTGGGGTCAGTGCAGGAGGTCAAGGAAGTTTTGAAGAACGTCTTCCCCAGTGAGAAAGAGATAGTTGTGAAAAGCCAAATCCT
TGCCGGTGGCCGTGGATTGGGAACTTTCAAAAGTGGACTGAAGGGTGGTGTCCATATTGTTAAGGCTGAGGAGGCTGAAAGCCTTGCAGCAAAAATGCTT
AACCAGGTCCTGGTAACAAAACAAACTGGTCCACAGGGGAAGGTTGTGGGCAANGTCTACTTATGCNANAAAATGTCACTTGTTAATGANATGTACTTTG
CNATCACCCTTGACAGGAAAACTGCTGGTCCACTCATTATA
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