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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21159  (registered. 2007)
Contig Information
Length 1163 bp
Clones 9 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0186500 [Oryza sativa (japonica cultivar-group)] >gi|46390040|dbj|BAD15416.1| receptor protein kinase PERK1-like protein [Oryza sativa Japonica Group] >gi|46390071|dbj|BAD15446.1| receptor protein kinase PERK1-like protein [Oryza sativa Japonica Group] >gi|113535652|dbj|BAF08035.1| Os02g0186500 [Oryza sativa (japonica cultivar-group)] >gi|215695544|dbj|BAG90735.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215704448|dbj|BAG93882.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218190212|gb|EEC72639.1| hypothetical protein OsI_06147 [Oryza sativa Indica Group]
Score 1207
Evalue 1.99401e-130
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21159 
GATTGCGGTGAAAGGCTCAAGAGTTGGAGCAACAAGGCTGAAAAGGAGTTTGCTGTCGAGGTCGAGGTTTTGGCACGAGTGCGGCATAAGAGCCTCTTGA
GCTTACGTGGATATTGCGCTGAAGGCCAGGAGCGTCTGATAGTCTACGACTATATGCAGAACCTGAGCTTGCACTCTCACCTGCACGGACAGCATGCAGC
TGAATGCCATCTTGGTTGGGAGCGAAGAATGAACATCGCCATTGATTCGGCTGAGGGCATCGCTTATCTTCATCACCATGCGATCCCACATATCATCCAT
AGAGACGTCAAGGCGAGCAACGTTCTCTTGGATGCGAATTTCCAAGCGCGGGTCGCCGATTTCGGGTTTGCGAAACTCATACCAGATGGTGCGACCCATG
TCACTACAAAGGTGAAAGGCACTCTCGGTTACCTCGCGCCGGAGTATGCGATGCTTGGCAAGGCAAAAGAGAGCTGCGATGTCTACAGCTTCGGAGTGCT
CCTGCTGGAGCTTGCCAGCGGAAAGAAGCCGGTCGAGAAGATAAACCCTACGACGAAGCTCACCATCACCGAGTGGGCGCTTCCACTCACCCGTGAGCAG
AAGTTCAAGGAGATGGCTGACCCAAAGCTGGGGGATAGCTTTGCCGAGGCCGAGGTGAAGCGGATGGTGCTCGTCGGGCTTGCTTGCACTCAGACCAAGC
CAGAACAGAGGCCGGTGATGTCCGAGGTTGTGGAGATGCTCAAGGGGGAATCTGCCGAGAAGTTCTCCATCTTGGAGAATGACGATCTGTTCAAGCCTCA
ACAGACGACCAGCTCCGTCCAGGGCACCTCTGGCCCCTGCAGCTCGGACGCCATCACCGAAGAGAAGGAATCGAAAGAGGATACGATCGAGGAGGCGACT
GATTCGAGCGAGACGGTTCCCTCAGCTAGGTAGTGTGATGCACAAAGGTGTGTATATCCCTTCCTGGGATGTGTGATTTGTGTATGTCTGTGCGTATGGT
TGTTTCTTGTTGGCAAGTTACTTGGGCCCTTCACCAGTCTAGAGATGTACTTGTGGTTCCGTGTATTGTTGATTTCTTTTGGCAATGGTTGTGATGTGGC
TTGTAAGACTCTTATTGGACTGGTTCCGACAATAACAAGCTGTTCATGAAAATAAAAAAAAAA
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