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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig10329  (registered. 2007)
Contig Information
Length 847 bp
Clones 3 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_RDr Root of dessiccated seed 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0248400 [Oryza sativa (japonica cultivar-group)] >gi|5042455|gb|AAD38292.1|AC007789_18 NADP-dependent isocitrate dehydrogenase [Oryza sativa Japonica Group] >gi|56784023|dbj|BAD81495.1| putative NADP-dependent isocitrate dehydrogenase [Oryza sativa Japonica Group] >gi|113532114|dbj|BAF04497.1| Os01g0248400 [Oryza sativa (japonica cultivar-group)] >gi|215704296|dbj|BAG93136.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1112
Evalue 7.99262e-120
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig10329 
AACTGCCTCGTTCTCTCCGCGCTCCGGTCTCCCCAGTCCACGCCGCGCAGGCTGGAAGAGCTCGAATTTCCTCACTCCCGCGTCGCCTCGCCTCGCCTCT
GCTCGCTCCGGAGAAGGCTAGCTGCCCCGCGAGCCGAGCGCGGCGCCCATGGCGTTCGACAAGATCCAGGTCGCCAACCCCATCGTCGAGATGGACGGTG
ACGAGATGACACGAATTATATGGAAATGGATCAAAGATAAGCTTATATTTCCTTTCCTGGACTTGGATATAAAATACTTTGACTTAGGTCTACCTAACCG
TGATGCTACTGGGGATAAAGTAACGATAGAAAGTGCAGAAGCTACCCTAAAGTATAACGTGGCCATCAAATGCGCAACTGTCACCCCAGATGAAGGACGC
GTAAAAGAGTTTAATTTAAAAGCTATGTGGAGGAGTCCAAATGGGACAATAAGGAACATCTTAAATGGAACTGTTTTCCGAGAACCAATCATCTGCAAGA
ATGTTCCTCGGCTTGTGCCTGGATGGACAAAACCCATATGCATTGGCAGACATGCTTTTGGTGATCAATACCGAGCAACAGATACAATCATTAGAGGGCC
AGGGAAGCTCAAGTTGATATTTGATGGCATAGAGGAACAAATAGAGTTGGATGTGTTCAACTTTAGTGGTGCTGGTGGAGTAGCATTGTCTATGTATAAC
ACTGATGAGTCAATTCGGGCATTTGCTGAAGCTTCGATGAATGTGGCTTACCAGAAAAGATGGCCACTTTATCTTAGTACCAAGAACACAATCCTGAAAA
AATATGACGGGAAGGTTTAAAAGACATATTCCAAGAAAACTATGAAA
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