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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22776  (registered. 2003)
Contig Information
Length 1098 bp
Clones 14 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 4
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Homology (BLAST) Top Hit Os09g0360400 [Oryza sativa (japonica cultivar-group)] >gi|48716651|dbj|BAD23319.1| putative holocarboxylase synthetase [Oryza sativa Japonica Group] >gi|113631210|dbj|BAF24891.1| Os09g0360400 [Oryza sativa (japonica cultivar-group)] >gi|125563403|gb|EAZ08783.1| hypothetical protein OsI_31044 [Oryza sativa Indica Group] >gi|125605409|gb|EAZ44445.1| hypothetical protein OsJ_027928 [Oryza sativa (japonica cultivar-group)] >gi|215701050|dbj|BAG92474.1| unnamed protein product [Oryza sativa Japonica Group]
Score 776
Evalue 1.74188e-80
Total Hit Count 40
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22776 
CAAACACTTGACAACAGAACCGACAGTAATATGCACAGATAAATAAAGTTTTACAATTTTACCCAGAACAGAAAACACAGGTGCACAAAGGCTACACAGC
TATCTTGACAAAGCAACAGGCTGTAAGCAGTAGTGAAAAACATATAAGACATGCTTACTTAGCATAACAGGCTATGGGGGGTGGGGGTTAAATTGAATAC
TCCTACTTGAGCGGTGACGACAGGCATCTCGCAGCCGGTTTCTTCTTTCACTGGATATGCTGTTCTTCCAGTTTGTCCTTTCACTGGACGTGCTTGCTAT
TCTTCTTCCATCTCTGTGGTCCTGTGGAGCGCACTGCTCAGGAGGAGTCATGAGCTGGGCTGTCCGAATGCATGTCCATGGATGAGTCGTTTGAAGCCGT
GGGATTAGGCTCGCGGGCTAAGCCGTTTGCAAAGTAGCCTGCATCCCCGCCCTGATCCAGATGGTATGGTTGGAGGCCCCGGCGCACGGGGCTGGATAGT
GCGTTGGAAAAGACCGCCGAGTTCTTGGGCTGCGTCAACCCTGGGTTTCCTAGTGCAAATAAGCTTGCAGATGGTTGATGGTTGCTTGTGTTGGGCATAT
GCACAGTAGCCTGAGTGCTTTGGCTTGCATATTGTGATCTTGGAGAGGCCAACGGATTGTCGCCTCCATACTGAATCTCATGCTGGACGTGCGAGGCTAT
ATCAGCAACTGTCAGCCTCAAACCATTTTCATGCTGTCTTAAGATCCATTCATACAGCTTTTCCATGGCGTGGCGCTCGCCGGCCTGGAAGGAGAGCTTC
TGGCCGCCCATGGCGAGCGTGTAGAGCTGCGAGAGGGAGTTGGCGGCGCCCCGGAACGCGCCGTACATGGCCCGGTCCGTCTCGTCCAGCCGCGCCGCCT
CCGCCTTCCGCTTCTTCCCCGTCATCTCTCGCCCGCGCTCCTCCGACCCCCGATCCGCCGCGGCGCCGTCCAATTCGGCCCGAATCGGGCGCCGGAACCC
TAGACCTGGGCGAGTGAGAGGGGGGCGGGCGAGATGCGCGCGAGGTCCAGGCGCGGAGACGAGGAGGAGGATGGAGGTCTGGAGGGCGTCGCGTCGAC
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