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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25363  (registered. 2007)
Contig Information
Length 2256 bp
Clones 169 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 15
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 7
Wh_EMC Dormant seed with cold treatment after water absorption 10
Wh_EMI Dormant seed with water absorption after breaking 36
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 7
Wh_KMV Shoot grown with continuous light after cold treatment 13
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 11
Wh_SHC Shoot grown with cold treatment 10
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 7
Wh_V483 Shoot grown under cold condition for 3days 11
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 16
Wh_VWD Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit heat shock cognate protein HSC70 [Brassica napus]
Score 1606
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25363 
GGCAGCAGCCGCCGCCAGCAGCTGCGCAAAGGCTCCTCAAACCCTAACCCTAGTCCTAGCTTAGCTTCCTTCTTCTCGATCTAGCTAGAGCCATGGGCGC
CGACCAAGGGCGAGGGGCCGGCCATCGGCATCGACCTCGGCACCACCTACTCGTGCGTCGGCGTGTGGCAGCACGACCGCGTCGAGATCATCGCCAACGA
CCAGGGCAACCGCACCACGCCCTCGTACGTCGCCTTCACCGACTCGGAGCGTCTCATCGGCGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAAC
ACCGTCTTCGATGCGAAGCGTCTTATCGGCAGAAGGTTTGCTGATGCCCCTGTCCAGAGTGACATTAAGATGTGGCCGTACAAGGTTATTCCTGGCCCTG
CAGACAAGCCTATGATTGTAGTGCAGTACAAGGGTGAGGACAAGCAGTTTTCAGCTGAAGAAATTTCTTCCATGGTCCTCATCAAGATGCGTGAGATCGC
TGAGGCTTACCTAGGAGTAACTATTAAGAATGCCGTTGTCACTGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATGCTGGTGTTATT
GCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAATTGCCTATGGTCTTGACAAGAAGGCTACCAGTGTCGGTGAGAAGAACGTGC
TTATCTTTGACCTCGGTGGTGGCACTTTTGATGTCTCTCTCCTTACCATTGAGGAGGGTATTTTTGAGGTCAAGGGCCACAGCCTGGTGACACTCACCTT
GGTGGGGGAGGACTTTGACAACCGTATGGTGAACCACTTTGTCCAAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGAAACCCCAGGTCTTTGAGG
AGGCTCAGGACTTCATGTGAGAGGGCGAAGAGGACCCTTTCTTCCACTGCCCAAACCACCATCGAGATTGATTCACTCTTCGAGGGAGTTGATTTCTATT
CCACCATCACCAGGGCCAGGTTTGAGGAGCTCAACATGGACCTCTTCAGGAAGTGCATGGAGCCAGTGGAGAAGTGCCTGAGGGATGCCAAGATGGACAA
GAGCACCATCCATGATGTCGTGCTTGTTGGTGGGTTCCACCAGAATCCCCAGAGTTCAGCAGCTGTTGCAGGACTTCTTCAACGGGAAGGAGCTCTGCAA
GAGCATCAACCCTGATGAAGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCAATCCTCAGTGGTGAGGGGAACGAGAAGGTGCAGGACCTTCTCCTCCTT
GATGTCACCCCACTGTCTCTTGGTCTTGAGACTGCTGGAGGAGTCATGACTGTGCTCATCACCCGGAACACCACCATCCCCACCAAGAAGGAGCAGGTCT
TCTCCACCTACTCCGACAACCAGCCTGGTGTGCTCATCCAGGTTTTTGAGGGTGAGAGGACAAGGACCAGGGACAACAACCTGGCTTGGCAAGTTTGAGC
TCTCCGGCATCCCGCCTGCACCCCAGGGGTGTTCCCCAGATCACTGTCTGCTTCGACATTGATGCCAACGGTATCCTGAATGTCTCTGCCGAGGACAAGA
CCACTGGCCAGAAGAACAAGATCACTATCACCAACGACAAGGGCAGGCTGAGCAAGGACGACATTGAGAAGATGGTCCAGGATGCAGAGAAGTACAAGTC
TGAGGATGAGGAGCACAAGAAGAAGGTTGATGCCAAGAACTCCCTGGAGAACTACGCCTACAACATGAGGAACACCATCCAGGACGAGAAGATTGCCTCC
AAGCTGCCTGCTGACGACAAGAAGAAGATTGAGGATGCTGTCGACGCCGCGATCCAGTGGCTTGACGCCAACCAGCTTGGTGAGGTTGACGAGTTTGAGG
ACAAGATGAAGGAGCTGGAGGGCCTCTGCAACCCCATCATCGCCAAGATGTACCAGGGTGCCGGTGCTGACATGCCCGGAGGCATGGACGAGGACGCGCC
GGCTGCCAGCGGCGGTGCTGGCCCCAAGATCGAGGAGGTCGACTAAGTTATTCTCTTTGATATAGTGAGAAAATACACTATACGCCATTTGTTTCAGTCC
TGGGTGCCAATCATATCACCTGGGCTGGAAGTTTTGTTGTACTTTTGGTCTGTAGCATCACGAGACTTGTGTGTACCGTAAAGCAATGCAATGATGCCAT
GTTTTGGCTCATTGTTGATTTCAGCTTAATGCTTATTGTTTGGACTAAAAAAAAAA
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