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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V4816_all.Contig83
Contig Information
Length 1011 bp
Tissue Shoot grown under cold condition for 16days
Clones 2 Clones [Download: CSV  ,  FASTA ]
whv16n1o12    rwhv16n1o12   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0136800 [Oryza sativa (japonica cultivar-group)] >gi|55296987|dbj|BAD68462.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza sativa Japonica Group] >gi|113594769|dbj|BAF18643.1| Os06g0136800 [Oryza sativa (japonica cultivar-group)] >gi|215692474|dbj|BAG87894.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215704676|dbj|BAG94304.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215737501|dbj|BAG96631.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218197521|gb|EEC79948.1| hypothetical protein OsI_21540 [Oryza sativa Indica Group]
Score 1278
Evalue 9.46746e-139
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V4816_all.Contig83 
TCTTCGTCGGGTTGAAGGCCCAGACCAGGCTCGGCTCGTCCGAGTCGTCGTGCCCGAATGTCAACGCCCGGTTCTACACCGCCGTCAACCGGAGGGTCTC
CCTGGGGTTGTCAAACAAAAGGGCTACCAGGGCACGTATTTCAATGATGCCTGTCGGCACACCACGGGTACCTTACAGAACACCTGGTGAAGGAACCTGG
CAGTGGCTTGACATATGGAATGCTTTATATCGTGAACGGATTATCTTCATCGGGGACACTATTGATGAAGAATTCAGTAACCAAGTACTGGCAAGCATGC
TGTATCTTGACAGTGTCGATGACACAAAAAAGATTCTTCTATACATCAATGGTCCAGGAGGAGATCTTACACCATGCATGGCGTTATATGATACCATGCT
AAGCCTAAAGAGTCCAATTGGTACTCATTGCCTGGGCTTTGCATTCAACTTGGCAGGATTCATTCTTGCAGCTGGTCAAAAGGGTTCACGTACGGGTATG
CCTCTTTGCCGTGTTTCACTTCAGTCACCTGCTGGAGCAGCTCGAGGCCAGGCTGATGATATAGAAAATGAATCAAACGAACTTAATCGGATCAAGAACT
ATCTTTATGGCAAGCTAGCAGAACACACGGGCCATTCTGTTGAAAAGGTTCATGAGGACCTATCGAGGTCGAAGCGCTTTGACGCCGAAGGAGCCCTCGA
ATACGGGATCATCGACCGTATCGTCAGGCCTTCCCGGATCAAGAAAGAGGGCGGCTCGACCACCGGTCAGAAGAAGGAGCTGCGGAATCTGGGACTCGGC
TAATCTTTAGATGTCAGCGCACCAGAGTTAGCCGTAGACCGCCACAGTTTTTCCACGTCTAGTCCTGCTTCGAAATCTCGACGCTTCCTTTCATCGGTTC
ATGCGGATGTACGAGATTTAGCTTGTCTCTCCGGTATCCCCAGACTTTTAAGACAGAGCGATAGCACACTGAGAAACGCCGCGCACGTTTGATGATTTCG
CGCGACATTAA
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