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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMI_all.Contig2195
Contig Information
Length 536 bp
Tissue Dormant seed with water absorption after breaking
Clones 36 Clones [Download: CSV  ,  FASTA ]
whei1c11    whei1m17    whei2j21    whei5d01    whei5m05    whei6j01    whei8k05    whei14g13    whei14g24    whei14k19    whei15c03    whei15n12    whei15n15    whei15p03    whei16h03    whei16i04    whei16o11    whei18a17    rwhei1c11    rwhei1m17    rwhei2j21    rwhei5d01    rwhei6j01    rwhei8k05    rwhei14g13    rwhei14g24    rwhei14k19    rwhei15c03    rwhei15n12    rwhei15n15    rwhei15n23    rwhei15p03    rwhei16h03    rwhei16i04    rwhei16o11    rwhei18a17   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Gamma-1-purothionin >gi|100843|pir||S11529 gamma-purothionin - poulard wheat >gi|157831231|pdb|1GPS|A Chain A, Solution Structure Of Gamma 1-H And Gamma 1-P Thionins From Barley And Wheat Endosperm Determined By 1h-Nmr: A Structural Motif Common To Toxic Arthropod Proteins >gi|227202|prf||1616227A purothionin gamma1
Score 283
Evalue 6.08379e-24
Total Hit Count 219
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMI_all.Contig2195 
TTTTTTTTTTGAACGTGAACCGTACGTTTTATTCTTATTATTATACCTTAGCCCGCCCATGCATGCATCGATCGAGATGCAGCAGCTGGCTGGCTAGTGA
TGACACGGACATACATACGACATACGTACGTAGAAAGGGGCACAGACATTCAAGTAGGTACACAGACGTATGGTTCCATGGGCTAGCTAGCTGACGTACG
GCGAAGGCCAGCTAGCCGTAGCACATATGATCAGCACTGCCTGATGCACTTGCACCGGCGGAAGGGCCCGTCGCAGTTGCCGCCGCCCCAGCCTTCTTGC
TGGCAGACTTGCGCGCAGTTCTTATTGGACATGCACGGCCCCTTGAACCCGGCGCTGCGCCGCCGGCAGATCTTCGCCTCCGCCCCCGGCACCGCCGCCT
CCTGTGCGATGAGGAGGAGAAGCAGGACCAAAACCACCTGCGTCGCCACCTTCTTGGTCCACATTGTGAACGGCCGGGCTGGGAGCGACCTAAACTCTGC
TTGCGCTACGTACTGGCTTTGCTACTGGTGGAGTTG
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