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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24126  (registered. 2007)
Contig Information
Length 1040 bp
Clones 24 Clones [Download: TSV  ,  FASTA ]
Wh_EMC Dormant seed with cold treatment after water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 3
Wh_SHC Shoot grown with cold treatment 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VWD Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os04g0281900 [Oryza sativa (japonica cultivar-group)] >gi|113563937|dbj|BAF14280.1| Os04g0281900 [Oryza sativa (japonica cultivar-group)] >gi|215686499|dbj|BAG87760.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218194508|gb|EEC76935.1| hypothetical protein OsI_15195 [Oryza sativa Indica Group]
Score 804
Evalue 9.04935e-84
Total Hit Count 156
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24126 
ACGAAAAGAGTATTGATTTTGCTTTGCTTCAAGCACCTTACAAGCAACTGAACTCCTTAAATTAGGAAGCTCATCGTAGTTACATAGATCACTTGGGTGC
CTGCAACGGAACTAGGTTCGCATTTTTGGAACGCATCAATGAATCCACCACAGCCTCACAGCAGAAGATTCAAAGCTAGTACGGTATATATAGAATAAAG
TAAAAAGAGAGGCAGATGCACTATATGTAGCTTGAAATTAACTATGAGCCCTTACAGATTATTTCGTTCGCCTACACACACAGCGATACTACTACGTACG
TACGTGTTTTGAGTTTTGACCCGTCATCGAGTAGCCAAGGCACAGCAGCTAGGGATCCTCTCGGCTCAGCGCGGGAAGGCAGCGATCTCGACGCCCTTGT
TGCCGAGCGAGGGCATGGGTGCGTCGTAGGCGCTGAAGAGGCGGTAGGACGAGATGAGGGAGAGGAGGATGTAGCAGACGACGGAGCCGAAGGTGATGGC
CACCGACGTCCGGGCCTGCCTGCAGAAGCCGCCGAACACGCCGCACGCCTCGCTCCACGTCACCTCCTTGTCGCCGTTGTACGCCAGGTAGAGTAGCTCT
GCCGACGCCGCGCCGGCCGCCAGGATCAGGTACGTGAACACCTGATCTAGGAGGAAGACGATCCAGGAGCGGGACAGGGTCGCCGGCCGCGGCACGGCAG
TGTAGAACGCGGAGACCAGGGAGTAGGCCGCGCACAGCCCGTTGGCATAAACCAGGTACTTGAATCCGCCGAGGTCGGAGTAGGAGACGGTGCCGTACTC
GTTGGTCTGCGTGTCGCGGAGCATGACGGCCATGGCGGCGACGCAGAGCCCCAGAGGCGCGGCGCGCAGCAGCGTCTCCAACGGACGGACACGCGCCTCC
GTGGCTGACAGGTCCCCTGCGATCAGCCCGTCCTCTCCTCCGCCGGTCGCCGGCGCGAGAAATCACCTTCTCGTCCGCCATCTTCGACATCTCGACCAGC
AGTCAGGGGCCAAAAACCAGCGTCGACGAAGAAAAGAGCT
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