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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMV_all.Contig2355
Contig Information
Length 1057 bp
Tissue Shoot grown with continuous light after cold treatment
Clones 6 Clones [Download: CSV  ,  FASTA ]
whkv10g18    whkv1c03    whkv16j16    rwhkv10g18    rwhkv1c03    rwhkv16j16   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0402300 [Oryza sativa (japonica cultivar-group)] >gi|50878377|gb|AAT85152.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|50878430|gb|AAT85204.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|113579044|dbj|BAF17407.1| Os05g0402300 [Oryza sativa (japonica cultivar-group)] >gi|215697746|dbj|BAG91740.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218196770|gb|EEC79197.1| hypothetical protein OsI_19905 [Oryza sativa Indica Group]
Score 999
Evalue 2.27672e-106
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMV_all.Contig2355 
AGTTTACAACACTCAGGCACATAAACTCACAATAGAACACCTATACATATGGTTGTACTTTGGCCTCATCTCTGGATGATGGCAAAAACTCACTACCATG
TCTTCCGAGTTATGTAGATAGCAATTCAAAAGACTTGATAAATGTTGGACATATGCCTGGGTTGGCACAAGGTCCTGGTGGTTCAGACAGGACCCATCAG
TTGTCATTCTGCCTGAGCATCTGTAGGATGGTCAGGAACAGGTTGAGGATGTCGAGGTAAAGCTCAACAGACGCCCAGATGTACTCGTCATAAGTGTGGC
GCTTTATCAAGTTCTCAGTGTCGTAGACGATGAAGCCTGAGAAGACTAGAGCTCCAAACCCGCCAATCACAGCATTCGATGCAGGTCCGAATGGGAAGAA
GATCTGGGTAAAGCTTATCACGACCAGGATGGTGAGAGCAGAAAACAGAAATGGTCCAAGGTAACTAAATTCCTTGCCCTTCTTTGCGGCCCAGAATGTG
TATGCAGTCAGAGAGACAACCACAGCTGAGGTCAGTACCAATGCTTGAAGCACAATAGTTCCTTCAGTGTTTGCACAAGCCACACCAATGCTGAAGCTCA
AGCACAGAGTGAACAAACCCAAGATAGCAAGATTGTGAGGGTGTCTGTGCTGATAGATGTACAATGGGATCATCAGGATGAAGGGGAGGACAGCGAGCAC
GAGCGCGAGGACGGGCGAGTTGGAGAGCGTGGCGTTGAGGGTGGGGTGGAAGACGGTGATGGCGGAGACGACGGTGGTGAGGACCAGCTGCGCGCAGAGG
ATGCCGTAGACCTTGCGGATGAAGCCCCAGCGGAGGGCGTTCTCCCCGCGCGAGATCCCCGGGTAGAGCGTCTCCCCGTTCCCCGCCTCCAGGTCGATCG
ACGACGCCTCCACCTTCTCCTTCATCTCCGGCGCCCGGCGGTAGCCCGACGGTGCCAGCGGCTGCATCTCCGTCGCCGACGCCATCTCTCTCACCGACGC
TGTCGGTGGTGGGGAATTGGGGATTTCGGTTGGGACGCGGTTTGTTCGATGCGCGAC
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