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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V4816_all.Contig5
Contig Information
Length 1339 bp
Tissue Shoot grown under cold condition for 16days
Clones 2 Clones [Download: CSV  ,  FASTA ]
whv16n4a05    rwhv16n4a05   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0241200 [Oryza sativa (japonica cultivar-group)] >gi|53980843|gb|AAV24764.1| putative phosphate translocator [Oryza sativa (japonica cultivar-group)] >gi|113578552|dbj|BAF16915.1| Os05g0241200 [Oryza sativa (japonica cultivar-group)] >gi|125551487|gb|EAY97196.1| hypothetical protein OsI_19118 [Oryza sativa Indica Group] >gi|215765430|dbj|BAG87127.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1149
Evalue 4.15721e-126
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V4816_all.Contig5 
CCGCAAAGCCCATCGGGTTTTTGGAGAGGTACCCGGCTCTTGTCACTGGTTTCTTCTTCTTCATGTGGTATTTTTTGAATGTGATATTTAACATCCTCAA
CAAGAAGATCTTTGATTACTTCCCCTATCCATACTTTGTGTCGGTGACCCATCTTTCTGTTGGAGTCTTGTACTGCCTTATCAGCTGGAGCACCGGTCTC
CTAAAGCGTGCGCCGATGAATTCGACGCTTCTGAAGCTGCTGCTGCCAGTTGCAATTTGCCATGCCATCGGTCATGTAACGAGCACTGTGTCTTTTGCTG
CTGTATCGGTCTCATTTGCCCACACCATTAAAGCTCTCGAGCCGTTCTTCAATGCCGCTGCTTCACAGTTTATTCTCGGGCAGCAAGTTCCCTTCACATT
GTGGTTATCTCTGGCTCCAGTTGTGATAGGTGTATCAATCGCATCTCTCACTGAACTCTCATTCAACTGGACTGGTTTCATCAATGCCATGATTTCTAAT
ATCTCATTCACCTACCGTAGCATTTATTCGAAGAAAGCTATGACTGACATGGATAGCACCAATCTGTATGCCTATATCTCTATAATTGCTCTCATCGTCT
GCATTCCTCCAGCACTCATTATTGAAGGACCTCAACTAGTGCAGCATGGATTTAAAGATGCAATTGCCAAAGTTGGATTAGCAAAATTAGTTTCCAATAT
TTTCTTGGCAGGCTTGTTCTATCACCTTTATAACCAGGTTGCAACAAACACATTGCAGCGAGTGGCCCCTCTAACACATGCCGTCGGGCAACGTGTTGAA
AACGTGTCTTTGTCATCGGCTTCTCAATCATCATTTTCGGGCAACAAGAATCACCACACAAACTGGAATTGGCACAGCCATTGCTATTTCTGGTGTTGCC
CTATACTCAGTTATCAAGGCTAAGATTGAGGAGAAAAAGGAAGGTGTGGCGGCGGCGGCTCCTTGAAGATGGAATAAGGTCCTCTCCGCCTAGCCCCCGT
CCTGACAGTGCGTCTTGCGTTGTTGGAGGGCATGTGGATGTGTGTCTTCGGCGGACTGCTTGGGATTCAGTCGGTATTGGTCTTTGCTGAATCTCCGTTG
ATCCAGTGTTTGTCCGTGTGTGTACAAGTTGTACCTTCCGATCTGTGGTTCTCTTCATCGTCGATGGTTGATGTTCTGGTGCCTTGGTCGTGTGGGGTCT
TAGCATAGCATGATGACTTCCCGACTATATTTAGTACAACAAGTTTTGCCCGGCCCGTTGAGGGAGAGGCGATGACAGAGGTGTGCTTTCGGCTCACTCC
AGTGCTTTAGTCGGCGCTAGGTTGTCTATGAAACTAGAT
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