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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24415  (registered. 2003)
Contig Information
Length 2503 bp
Clones 29 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 6
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 5
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VHS Shoot with heat shock treatment 2
Homology (BLAST) Top Hit Os03g0278200 [Oryza sativa (japonica cultivar-group)] >gi|108707482|gb|ABF95277.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|108707483|gb|ABF95278.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|108707484|gb|ABF95279.1| rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113548195|dbj|BAF11638.1| Os03g0278200 [Oryza sativa (japonica cultivar-group)] >gi|218192544|gb|EEC74971.1| hypothetical protein OsI_10998 [Oryza sativa Indica Group]
Score 3401
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24415 
TGACCACAAACTACACATAAAAGTCTTGTCTGCCATACAAACTTCAGATATGAAAACCAAGAAAAACAACACGTAAACAGGATGCACAAGCGCAGCATCA
TGCACATGAAAGGCACCTGATAAATAGAAACAAGATTTTAAGATCTGTTCTCATAGATAACCAGGCCAGCAAACATATCCACCACTACATAGAACATCTG
ATAATACTCAAGTGAAACATAACGCGTAACAAAAAATGGTAAATATGTATGCATGCTATACCACAATAAAATTGACCACAGCTGCCACCGTGCAATATAT
TAGCTAATTAGAAATAGCTTATAGCAGACCTGTGTCACATGAATCCTCAATTAGTAGACACCTTCCTGTTTGGCTCAAAGACATTCCTGATCAAAGATTC
CTTAATGGACAGTAGCTCAGGGAACTCGGACTTCAGCTTTGACGCGTCCATTTCGTTGTTGCTTCTTGGTGCAACTATAACCTTGGCCTGCTCTTCGAGC
GTGAAGTTGGTCCACTTGAAGTCCGGGTTTATGTATTCCTTGTACATCTCCAGAATCTCGTTGTGACTGACAACCCCTGGGTTGGTGAAATTCCATATGC
CCCTACAATCCCGCTTCGCCATCTCAACAGAGATAGGCAACAATTCATCCAAAATTGTCATACTGTTCGGAATGTTCACCACCTTGTCATAGCGGGCTAT
TTTTGTGATGAAGTTACGAGGATTGCTCAGGTCTGATGATATGGGCATCCTGACTCTAAGAGTACAGACATTATCATAGTCCTTCAATAACTCTTCCACC
ATGGCTTTGGTTTTGGAATAAAATGAACCTACAAAGTTGGGCGTGTCCTCCTCTTTAAAACCAATTCCAGACCCTTCAGGGTGTTCAGCATTATACTCAA
ATATGCAACCTGTAGCATAATTAATCATGAGCAACCCCTGCTCACGACAAACATCAGCAAGATTCAAGGTGCCTACAACATTGGTGCGGATAGTGTCCTG
TTTGTGGGTCTCACACCAGTCAACATTTGGCCTTCCAGTGACACCAGCAGCATTGAAAACATGAGTCGGCTTCACATTTCTAATGTCCTGCAAGAGCTGA
GAGCGCTCTTGCAGGCGCCCTTTACCATATTCATAAGGTATGCCTTGCTTCTCACATATCTTCCCAAGTAGGCCACCAATCCATCCAGTCTTGCCATATA
TTAAGAACTTGTAGGTGGCCTTTTGAGGGACACTGCTGGTACTCTTGGATGTGGCTGCAGCAGGTACTGTACTGCATTCCTTGGCTTCAGCTGGAGAAGA
AGCAAGAGATTTGATTTCCTCAGTCCAGTTATGCCTTTCAACTCCAGGCGTCATCAACATCCTTGGATGAGGGAGCAATGCACCGGCAACATCTCCCCAG
TAATCAGGATTGCTGGTGTACCATTCAATTGTTTTCTTCAAACCCTCTTCCCATGTCGTGCGCTCTGCCCATCCTAACTTCTTCAGTTTCTGATCATCCA
GGAAGTACCTCTGGTCATTGAAGGGCCTGTTCTCGACAAACCTGATGACCTTTTCGGTGTCCAAGCCAAATAGCTTGCATATGTCACTGGCCACATCAAT
TACCCTCCTCTCCTTCACAGTACCAATATTATACACATGTCCAACCTCTCCTTTGTGAAGAACTACCTCAAAAGCTTCAGCAACATCCTCACAGTACAGG
TAGCTCCTGACATTAGAGCCATCACCATGAATTGGAAGGGGCAAGCCTTTCATGGCCAAAAGGATAAATTTTGGGATGAGCTTCTCAGGGAACTGATTTG
GTCCATACACATTGTTGCCTCGGGTTGTAATCACAGGAAGACCATAAGACCTCCCATAAGCCATCACAAGCATTTCAGCCCCAGCTTTGGTAGCTGAATA
TGGATTTGTCGGAAGCAACTGTGAGGCCTCATGGTTACCAACCACAGCATCCTCATCAGTTTCTCCGTACACCTCATCAGTACTGACGTGAATAAATCTT
CTGATCTGGCCAGTAACCTTGCACGCCTCAAGGAGAACGTGGGTGCCATATATGTTGTTCTTTGTGAACTCAAAGGAATTGCCAAACGAATTATCCACAT
GAGTCTGGGCAGCAAAGTGCATGATGGTGTCAATCGACTCAGTGATGAGAAGATAGTTCACCAGGTCAGCACTTGCAATGTCGCCCTTGACAAACTTGAA
ATTTGGCGATGGCCGGGAAGGGTTGAGATTTTTCAGGTTGGAGCAGTAGTCAATCTTGTCGAGGACGACAATCTTGTAGTGAGGATAGCTCCTAATTAGA
CGGTTCGCCACATGGGATGCAATGAAACCCGCAGCACCAGTTATGAGGATGTTCTTGGGCTCATAGGTCGCCATCTTGGCCGGGCAGATCGCGCAGGCGG
CGAGGGCGCGCGGAGGAGATCTGGCGCGCGGCGACGGCGACGGCGACGTCGCCTTGGAGATCGGCAGGGGTCGAAGGAGAATCTTCGCGGAGGGGGAGGA
GGG
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