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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig19904  (registered. 2007)
Contig Information
Length 2131 bp
Clones 8 Clones [Download: TSV  ,  FASTA ]
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os04g0394200 [Oryza sativa (japonica cultivar-group)] >gi|21740743|emb|CAD40552.1| OSJNBa0072K14.5 [Oryza sativa (japonica cultivar-group)] >gi|113564223|dbj|BAF14566.1| Os04g0394200 [Oryza sativa (japonica cultivar-group)] >gi|116309381|emb|CAH66460.1| H0718E12.4 [Oryza sativa (indica cultivar-group)] >gi|125590215|gb|EAZ30565.1| hypothetical protein OsJ_014048 [Oryza sativa (japonica cultivar-group)] >gi|215768038|dbj|BAH00267.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1564
Evalue 1.77112e-171
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig19904 
AATTCAACCGGAAAGGAACTACATAACACTTGGCAGTTCATACTACAAGCACGCCCATCACAAGACACGAGGCGTCAAAGCAAAACAATGCAACACCCCA
TCGACCGACCCATCTAATCCAAGTCCAGACAAACACATGACATCCTTATTGCTCTTCTTCTTCATGATCTTCTTCTTCTTCTCCATTAACGACCTTCAGG
CGCCGAGCTTGAATCAGCAGCAGCCCTCAACAGCCTCGCCAAATCCCAATTCGGATAGCTTGAGGTGTGCCTCAGCGTAGTCAGCAAAGAAAGCATCCTC
ATCCGCAGCATATTTGTCCACAAGTGGGCGGAAGGCCGGGTCAGTCAGGAGGGTCTTGTCGGTCGGCAACTGAAGAAGGCCTTCCTTCTCCCCACAAAGG
AGCTCAGTGAAGTAAGAGTTGTCGAAGATCAAAGGGTTGGCAGTCCAGGCTCCCTCAAAGCCGGACCTCTCCTTGTGGCATCTTCCCAGGGTGTGACCAC
CAGAAAGATTCCCCTCCACCTCGTCGCCCTCGCAGATCCCCCACCCCCCGGCGAATGGCGTCCCGTCTCGCGTCCCGCCTCCTCCTCCGCCGCCCCGCCG
CCGTATTAAGTTTGCTCCAGAGTTCTAGACATGCTAGACATTTCAGCACTCAGTTACTTGAAGGTGTTCCGAGACTTCCAAAGCCAACATGTGAACGCTA
TTTCCTTCGAAATGCTTCTCCTTATCAAATTTGGAGTAGATCATTTGCTTCAGAGAATGGTGACTTGGTTGAAGCTGTTGTGCCCTTCATGGGTGAATCT
GTCACTGATGGAACCCTTGCCAATTTCTTAAAGAAACCTGGTGATAGAGTTGAAGCTGATGAGGCGATAGCTCAGATTGAAACTGACAAGGTTACAATAG
ATGTTTCCAGTCCAGAAGCTGGGGTAATTGAAAAGTTCATTGCCAGTGAAGGTGACACTGTTACTCCAGGTACCAAAGTTGCCGTGATATCTAAGTCTGC
TGCTCCAAGTGAGGCCCATGTTGCACCATCTGAAGAGACCTCCCAGAAGGAGACCCCTCCACCACCTCCTCCAGAAAAACCTAAGGTCGAGGCAAAATCA
CCAAAAGTAGAATCTGTCAAACCACAGGCGTCAAAACTAGCCTCCCCCTCAGAACCTCAGCTCCCTCCAAAGGAAAGAGAGAGACGGGTGTCAATGCCAA
GGCTCAGGAAGCGTATAGCAAATCGTTTGAAGGATTCTCAGAACACTTTTGCACTACTGACTACATTCAACGAAGTTGACATGACCAATTTGATGAAACT
GCGGACTGACTACAAAGATGAGTTTGTTAAGAAGCATGGTGTCAAATTGGGCCTGATGTCCTGCTTTGTTAAGGCTGCTGTTTCTGCGCTTCAAAATCAG
CCAATTGTCAATGCTGTTATTGATGGTGATGACATCATCTACAGAGACTACATTGACGTTAGTGTTGCTGTTGGCACTTCCAAGGGTCTTGTGGTGCCTG
TTATCCGTGATACAGAAGGGATGAACTTTGCTGACATTGAGAAGGGGATAAACAGCCTTGCAAAGAAGGCAACTGAGGGGGCATTGTCAATTGATGAGAT
GGCAGGGGGAACCTTCACAATCTCAAACGGTGGTGTCTATGGAAGTCTTATCAGCACACCTATCATCAACCCTCCACAGTCAGCAATTCTTGGAATGCAT
TCTATTGTCCAACGCCCTGTGGTTGTGGATGGCTCCATCCTTGCGAGGCCAATGATGTACCTTGCACTGACATATGACCATAGGCTGATAGATGGCAGAG
AAGCTGTTCTGTTTCTGCGCCGCATCAAGGACGTGGTTGAAGATCCACGGAGGTTGCTCCTTGACATATAGTTCTGTTTGTTACTTCTGGGGTAAAGATT
GCTTCACATCGATTTCGGAATAATTGTACACAAAATTTTGACTCATGCCGTAGTCGCTTCTCCAACAATTGAGAATTCGGTTGCTGGCCTCTGAATTGTA
GTAGAAACATCAACGAATTCATTTCCTTTTTCTGAGGTTATACTTGTTGGGACGTACTAGTTCCCTAAACATATTATGATCTACAATAGCAATGGACACC
CTCAACTTTGTCGTGCCATTTAAAAAAAAAA
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