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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig14984  (registered. 2007)
Contig Information
Length 1043 bp
Clones 4 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 1
Wh_KMP Shoot grown under continuous light 2
Wh_SHDr Shoot grown with dessication 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0653800 [Oryza sativa (japonica cultivar-group)] >gi|55296497|dbj|BAD68693.1| WD-40 repeat family protein-like [Oryza sativa Japonica Group] >gi|113533275|dbj|BAF05658.1| Os01g0653800 [Oryza sativa (japonica cultivar-group)] >gi|218188769|gb|EEC71196.1| hypothetical protein OsI_03104 [Oryza sativa Indica Group]
Score 547
Evalue 5.74822e-54
Total Hit Count 21
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig14984 
AACATGATATGACAAATCACAGAAGGCTTGGGCTATGGCTGCAGTCACGGTATAGTTCTCTTCCTGACGAGAACAGCAGATGTACATGGCTACTCACATG
CTGCTCGTCGTCTTTTGAGCACTACATATAACAAATATCTATACCAATGGAAAAAATTACAGTGGGACAAAGGAATCAGCACACATAAAAAAAATGGCAC
ACTGCTATGAGAACTGAATCAGAAATATTTTTATACAGCAGAAATACTGGGTGTAGGTGATGGCGACACCTCTGTTGAAGGTGGTTTATCCTGTGTCTCT
GGTTCCTTGGAAGAAGGTGCATCATTTGTAGAATCACTGGGAGTAACAGCAAGTGCATCAGTGCCACTGGAATCAGCTGCTGGGGCAGGAGCTGGAGCAG
CAGCAGCGTCAGGACTGCTATTTGTTGGGTCTGGAACCGGAGCTTCTGTAGCTTCCCCAGTACCAGGGGCTGCAGTAGCTTCGGCATTGCTGGTAGCTGC
TGTAGCCTCCACATTGTCAGGAGCTGTTGTAGCCTCTGATGGCTTTACCTCATCGGTGCTCTGTGCCGGAGCAGGAGGGGCTTGAGCCATGGGGGCACCT
TGTGCCACGGGAGTACCTTGGGCCATTGGGGTGCTTTGATTCATGGGAGTACCTTGAGCCATTGGGGTGCCTTGATTCATAGGAGCACCTGCATTTGGGG
TCTGTGCGGCATTAGGAAGCCCAGGTTTTGCAGCAGCCTTTTTAATAATGATGGGAGGTGCAGATAGAGGCGGCATTCCAGGAGGCAGTATTTCAATTGG
TGGCTTTTTCTCAGTTTCTCCCAAACTAGTGAGCTTCGGGTCCTCAAGAGAAGCCAAGAACGCTGCTGCAGCATCGGTTTTTACGGTTGGTGTGTGATCC
AGCTCCTTTTGTAGCATCTTGTTCCATGTTATGACTGAGCTCCTTAATGATGGACGACCATGGGCTTGAGCATGTAAAACGGCCTCAGCCAGCATTCCTG
TGTCTTGCCATGCTTTCTCCATGAGGGCATTATCACCCAGAAC
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