遺伝子 - 詳細

詳細 - 遺伝子

Basic Information
CGSNL 遺伝子シンボル	SPO11-5
遺伝子シンボルシノニム	OsSPO11-5, OsSPO11-5C, SPO11-1A, SPO11-1B, SPO11-1C, SPO11-1D, OsUBP13, UBP13, OsUBP35, UBP35
CGSNL 遺伝子名	TOPOISOMERASE 6 SUBUNIT A-LIKE PROTEIN
遺伝子名シノニム	ubiquitin-specific processing protease 13, Ubiquitin-specific protease 35
タンパク質名	TOPOISOMERASE 6 SUBUNIT A
対立遺伝子
染色体番号	11
解説	GU170364(Indica), AY154916/AY154917/AY154918/AY154919(Japonica). GO:0036459: thiol-dependent ubiquitinyl hydrolase activity. OsUBP35 in Ma et al. 2019.
形質クラス	生化学的性質
発現
Sequence/Locus
cDNA Accession No.	AK065551 AK099478
MSU ID	LOC_Os11g34270.1
RAP ID	Os11g0545300
Links	Oryzabase Chromosome View ( IRGSP 1.0 / Build5 ) RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List (Test version)	-
マップ
位置情報(cM)
リンケージマップ	Classical linkage map
文献
Ma X., Zhang J., Han B., Tang J., Cui D., Han L. Plant Cell Rep. 2019 38(3) 321-331 FLA, which encodes a homolog of UBP, is required for chlorophyll accumulation and development of lemma and palea in rice.
Wang D.H., Song W., Wei S.W., Zheng Y.F., Chen Z.S., Han J.D., Zhang H.T., Luo J.C., Qin Y.M., Xu Z.H., Bai S.N. Front Plant Sci 2018 9 1636 Characterization of the Ubiquitin C-Terminal Hydrolase and Ubiquitin-Specific Protease Families in Rice (<i>Oryza sativa</i>).
An,X.J., Deng,Z.Y. and Wang,T. PLoS One 2011 6 (5) e20327 OsSpo11-4, a Rice Homologue of the Archaeal TopVIA Protein, Mediates Double-Strand DNA Cleavage and Interacts with OsTopVIB
TextPresso Search	Search textpresso for SPO11-5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID	-
オントロジー
Gene Ontology	chromosome( GO:0005694 ) ubiquitin-dependent protein catabolic process( GO:0006511 ) protein deubiquitination( GO:0016579 ) DNA catabolic process, endonucleolytic( GO:0000737 ) endodeoxyribonuclease activity, producing 3'-phosphomonoesters( GO:0016889 ) DNA binding( GO:0003677 )
Trait Ontology	-
Plant Ontology	-
関連系統
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形質画像
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更新日
2019-08-19 20:18:18.509

Rice Database Oryzabase

遺伝子 - 詳細

詳細 - 遺伝子