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Basic Information
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CGSNL 遺伝子シンボル
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RSR1
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遺伝子シンボルシノニム
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AP2/EREBP#090, AP2/EREBP90, OsTOE1, TOE1, qHD5, AP2-1, AP2/EREBP/RSR1, OsRSR1, DLN130, DLN130a, DLN130b, OsDLN130, OsDLN130a, OsDLN130b
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CGSNL 遺伝子名
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RICE STRACH REGULATOR 1
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遺伝子名シノニム
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AP2/EREBP family transcription factor, APETALA2/ethylene-responsive element binding protein 90, Rice Starch Regulator1, APETALA2-1, DLN repressor 130, DLN motif protein 130
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タンパク質名
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RICE STRACH REGULATOR 1
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対立遺伝子
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rsr1
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染色体番号
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5
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解説
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AY685117. rsr1 mutants have a larger seed size and increased seed mass and yield. RSR1 overexpression suppresses the expression of starch systhesis genes. qHD5 in Zhan et al. 2015 and Sun et al. 2016. qHD5 is a major and novel QTL for HD which was pleiotropic and was limited to a 309.52 Kb region (between RM17788-RM5374 oc chromosome 5) (Zhan et al. 2015). This gene (LOC_Os05g03040) was concluded to be the most probable candidate gene for qHD5 (Sun et al. 2016). AP2-1 in Dai et al. 2016. miR172a-d target gene.
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形質クラス
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生殖器官 - 穂
種子 - 生理的な特色 - 貯蔵物質
種子 - 形態学的な特色
耐性、抵抗性 - ストレス耐性
生殖器官 - 出穂期
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発現
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Sequence/Locus
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cDNA Accession No.
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CT836468
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MSU ID
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LOC_Os05g03040.1
LOC_Os05g03040.2
LOC_Os05g03040.3
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RAP ID
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Os05g0121600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Liu Z., Li P., Yu L., Hu Y., Du A., Fu X., Wu C., Luo D., Hu B., Dong H., Jiang H., Ma X., Huang W., Yang X., Tu S., Li H.
Int J Mol Sci 2023 24(9)
<i>OsMADS1</i> Regulates Grain Quality, Gene Expressions, and Regulatory Networks of Starch and Storage Protein Metabolisms in Rice.
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Liu R., Feng Q., Li P., Lou G., Chen G., Jiang H., Gao G., Zhang Q., Xiao J., Li X., Xiong L., He Y.
Int J Mol Sci 2022 23(15)
<i>GLW7.1</i>, a Strong Functional Allele of <i>Ghd7</i>, Enhances grain size in Rice.
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Zhou S., Huang K., Zhou Y., Hu Y., Xiao Y., Chen T., Yin M., Liu Y., Xu M., Jiang X.
BMC Plant Biol. 2022 22(1) 269
Degradome sequencing reveals an integrative miRNA-mediated gene interaction network regulating rice seed vigor.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
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Su Z., Tang Y., Ritchey L.E., Tack D.C., Zhu M., Bevilacqua P.C., Assmann S.M.
Proc. Natl. Acad. Sci. U.S.A. 2018 115(48) 12170-12175
Genome-wide RNA structurome reprogramming by acute heat shock globally regulates mRNA abundance.
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Sun B., Zhan X.D., Lin Z.C., Wu W.X., Yu P., Zhang Y.X., Sun L.P., Cao L.Y., Cheng S.H.
Theor. Appl. Genet. 2017 130(1) 247-258
Fine mapping and candidate gene analysis of qHD5, a novel major QTL with pleiotropism for yield-related traits in rice (Oryza sativa L.).
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Dai Z., Wang J., Zhu M., Miao X., Shi Z.
Front Plant Sci 2016 7 1891
OsMADS1 Represses microRNA172 in Elongation of Palea/Lemma Development in Rice.
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Zhang H., Lu Y., Zhao Y., Zhou D.X.
Plant Sci. 2016 248 28-36
OsSRT1 is involved in rice seed development through regulation of starch metabolism gene expression.
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Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015 112(50) 15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
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Zhan X., Sun B., Lin Z., Gao Z., Yu P., Liu Q., Shen X., Zhang Y., Chen D., Cheng S., Cao L.
Gene 2015
Genetic mapping of a QTL controlling source-sink size and heading date in rice.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Fu F.-F., Xue H.-W.
Plant Physiol. 2010 154(2) 927-938
Coexpression analysis identifies rice starch regulator1, a rice AP2/EREBP family transcription factor, as a novel rice starch biosynthesis regulator.
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TextPresso Search
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Search textpresso for RSR1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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transcription factor activity( GO:0003700 )
DNA binding( GO:0003677 )
transcription, DNA-dependent( GO:0006351 )
organ morphogenesis( GO:0009887 )
maintenance of inflorescence meristem identity( GO:0010077 )
vegetative to reproductive phase transition( GO:0010228 )
regulation of starch biosynthetic process( GO:0010581 )
nucleus( GO:0005634 )
photoperiodism, flowering( GO:0048573 )
floral organ development( GO:0048437 )
response to heat( GO:0009408 )
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Trait Ontology
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panicle size( TO:0006032 )
spikelet meristem identity( TO:0006030 )
days to heading( TO:0000137 )
1000-seed weight( TO:0000382 )
grain size( TO:0000397 )
heat tolerance( TO:0000259 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2023-08-31 09:27:19.198
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更新情報
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