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Basic Information
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CGSNL 遺伝子シンボル
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SMG1
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遺伝子シンボルシノニム
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OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6, OsSTS, STS
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CGSNL 遺伝子名
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SMALL GRAIN 1
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遺伝子名シノニム
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MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11, salt-tolerant and small grains
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タンパク質名
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MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4
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対立遺伝子
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smg1, smg1-1, smg1-2, large11-1D, osmkk4, mapkk4, sts
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染色体番号
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2
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解説
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DQ848674. Gene Expression Omnibus database: GSE15613. TO:0000970: panicle density. TO:0000847: panicle inflorescence morphology trait. TO:0000919: grain weight. GO:2000377: regulation of reactive oxygen species metabolic process.
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形質クラス
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生化学的性質
栄養器官 - 葉
栄養器官 - 根
種子 - 形態学的な特色
種子 - 形態学的な特色 - 粒形
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - 害虫抵抗性
耐性、抵抗性 - ストレス耐性
QTLの特性 - 収穫と生産性
生殖器官 - 穂、枝梗
生殖器官 - 小穂、花、頴、芒
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発現
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Sequence/Locus
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cDNA Accession No.
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AK120525
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MSU ID
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LOC_Os02g54600.1
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RAP ID
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Os02g0787300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Guo T., Lu Z.Q., Xiong Y., Shan J.X., Ye W.W., Dong N.Q., Kan Y., Yang Y.B., Zhao H.Y., Yu H.X., Guo S.Q., Lei J.J., Liao B., Chai J., Lin H.X.
Nat Commun 2023 14(1) 1640
Optimization of rice panicle architecture by specifically suppressing ligand-receptor pairs.
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Liu J., Shen L., Guo L., Zhang G., Gao Z., Zhu L., Hu J., Dong G., Ren D., Zhang Q., Li Q., Zeng D., Yan C., Qian Q.
Rice (N Y) 2023 16(1) 47
OsSTS, a Novel Allele of Mitogen-Activated Protein Kinase Kinase 4 (OsMKK4), Controls grain size and salt tolerance in Rice.
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Cui D., Zhou H., Ma X., Lin Z., Sun L., Han B., Li M., Sun J., Liu J., Jin G., Wang X., Cao G., Deng X.W., He H., Han L.
Plant Commun 2022 3(3) 100325
Genomic insights on the contribution of introgressions from Xian/Indica to the genetic improvement of Geng/Japonica rice cultivars.
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Liang J., Zhang Q., Liu Y., Zhang J., Wang W., Zhang Z.
BMC Plant Biol. 2022 22(1) 20
Chlorosis seedling lethality 1 encoding a MAP3K protein is essential for chloroplast development in rice.
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Chen J., Wang L., Yuan M.
Int J Mol Sci 2021 22(4)
Update on the Roles of Rice MAPK Cascades.
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Tian X., He M., Mei E., Zhang B., Tang J., Xu M., Liu J., Li X., Wang Z., Tang W., Guan Q., Bu Q.
Plant Cell 2021
WRKY53 Integrates Classic Brassinosteroid Signaling and the Mitogen-Activated Protein Kinase Pathway to Regulate Rice Architecture and seed size.
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Zhang Z., Xiao W., Qiu J., Xin Y., Liu Q., Chen H., Fu Y., Ma H., Chen W., Huang Y., Ruan S., Yan J.
PLoS ONE 2020 15(9) e0238381
Nystose regulates the response of rice roots to cold stress via multiple signaling pathways: A comparative proteomics analysis.
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Guo T., Lu Z.Q., Shan J.X., Ye W.W., Dong N.Q., Lin H.X.
Plant Cell 2020 32(9) 2763-2779
<i>ERECTA1</i> Acts Upstream of the OsMKKK10-OsMKK4-OsMPK6 Cascade to Control spikelet number by Regulating Cytokinin Metabolism in Rice.
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Guo T., Chen K., Dong N.Q., Shi C.L., Ye W.W., Gao J.P., Shan J.X., Lin H.X.
Plant Cell 2018 30(4) 871-888
<i>GRAIN SIZE.AND NUMBER1</i> Negatively Regulates the OsMKKK10-OsMKK4-OsMPK6 Cascade to Coordinate the Trade-off between grain number per Panicle and GRAIN SIZE.in Rice.
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Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018 9(6)
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
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Xu R., Yu H., Wang J., Duan P., Zhang B., Li J., Li Y., Xu J., Lyu J., Li N., Chai T., Li Y.
Plant J. 2018 95(6) 937-946
A mitogen-activated protein kinase phosphatase influences grain size and weight in rice.
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Kishi-Kaboshi M., Seo S., Takahashi A., Hirochika H.
Plant Cell Physiol. 2018 59(5) 903-915
The MAMP-Responsive MYB Transcription Factors MYB30, MYB55 and MYB110 Activate the HCAA Synthesis Pathway and Enhance Immunity in Rice.
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Hu L., Ye M., Kuai P., Ye M., Erb M., Lou Y.
New Phytol. 2018 219(3) 1097-1111
OsLRR-RLK1, an early responsive leucine-rich repeat receptor-like kinase, initiates rice defense responses against a chewing herbivore.
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Xu R., Duan P., Yu H., Zhou Z., Zhang B., Wang R., Li J., Zhang G., Zhuang S., Lyu J., Li N., Chai T., Tian Z., Yao S., Li Y.
Mol Plant 2018 11(6) 860-873
Control of grain size.and Weight by the OsMKKK10-OsMKK4-OsMAPK6 Signaling Pathway in Rice.
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Qiu J., Hou Y., Wang Y., Li Z., Zhao J., Tong X., Lin H., Wei X., Ao H., Zhang J.
Int J Mol Sci 2017 18(1)
A Comprehensive Proteomic Survey of ABA-Induced Protein Phosphorylation in Rice (Oryza sativa L.).
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Yamada K., Yamaguchi K., Yoshimura S., Terauchi A., Kawasaki T.
Plant Cell Physiol. 2017
Conservation of chitin-induced MAPK signaling pathways in rice and Arabidopsis.
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Wang C., Wang G., Zhang C., Zhu P., Dai H., Yu N., He Z., Xu L., Wang E.
Mol Plant 2017 10(4) 619-633
OsCERK1-Mediated Chitin Perception and Immune Signaling Requires Receptor-like Cytoplasmic Kinase 185 to Activate an MAPK Cascade in Rice.
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Tian X., Li X., Zhou W., Ren Y., Wang Z., Liu Z., Tang J., Tong H., Fang J., Bu Q.
Plant Physiol. 2017 175(3) 1337-1349
Transcription Factor OsWRKY53 Positively Regulates Brassinosteroid Signaling and Plant Architecture.
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Singh P., Sinha A.K.
Plant Cell 2016
A Positive Feedback Loop Governed by SUB1A1 Interaction with MITOGEN ACTIVATED PROTEIN KINASE 3 Imparts submergence tolerance in Rice.
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Jalmi S.K., Sinha A.K.
Sci Rep 2016 6 37974
Functional Involvement of a Mitogen Activated Protein Kinase Module, OsMKK3-OsMPK7-OsWRK30 in Mediating Resistance against Xanthomonas oryzae in Rice.
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Liu S., Hua L., Dong S., Chen H., Zhu X., Jiang J., Zhang F., Li Y., Fang X., Chen F.
Plant J. 2015
OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production.
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Singh P., Mohanta T.K., Sinha A.K.
PLoS ONE 2015 10(4) e0123620
Unraveling the Intricate Nexus of Molecular Mechanisms Governing Rice Root Development: OsMPK3/6 and Auxin-Cytokinin Interplay.
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Chujo T., Miyamoto K., Ogawa S., Masuda Y., Shimizu T., Kishi-Kaboshi M., Takahashi A., Nishizawa Y., Minami E., Nojiri H., Yamane H., Okada K.
PLoS ONE 2014 9(6) e98737
Overexpression of phosphomimic mutated OsWRKY53 leads to enhanced blast resistance in rice.
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Yoo S.J., Kim S.H., Kim M.J., Ryu C.M., Kim Y.C., Cho B.H., Yang K.Y.
Plant Pathol. J. 2014 30(2) 168-77
Involvement of the OsMKK4-OsMPK1 Cascade and its Downstream Transcription Factor OsWRKY53 in the Wounding Response in Rice.
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Duan P., Rao Y., Zeng D., Yang Y., Xu R., Zhang B., Dong G., Qian Q., Li Y.
Plant J. 2014 77(4) 547-57
SMALL GRAIN 1, which encodes a mitogen-activated protein kinase kinase 4, influences grain size in rice.
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Wankhede D.P.a, Kumar K.a b, Singh P.a, Sinha A.K.a
Rice (N Y) 2013 6 35
Involvement of mitogen activated protein kinase kinase 6 in UV induced transcripts accumulation of genes in phytoalexin biosynthesis in rice
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Yamaguchi K., Yamada K., Ishikawa K., Yoshimura S., Hayashi N., Uchihashi K., Ishihama N., Kishi-Kaboshi M., Takahashi A., Tsuge S., Ochiai H., Tada Y., Shimamoto K., Yoshioka H., Kawasaki T.
Cell Host Microbe 2013 13(3) 347-57
A receptor-like cytoplasmic kinase targeted by a plant pathogen effector is directly phosphorylated by the chitin receptor and mediates rice immunity.
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Kim S.H., Oikawa T., Kyozuka J., Wong H.L., Umemura K., Kishi-Kaboshi M., Takahashi A., Kawano Y., Kawasaki T., Shimamoto K.
Plant Cell Physiol. 2012 53(4) 740-54
The bHLH Rac Immunity1 (RAI1) Is Activated by OsRac1 via OsMAPK3 and OsMAPK6 in Rice Immunity.
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Kishi-Kaboshi M., Okada K., Kurimoto L., Murakami S., Umezawa T., Shibuya N., Yamane H., Miyao A., Takatsuji H., Takahashi A., Hirochika H.
Plant Journal 2010 63(4) 599-612
A rice fungal MAMP-responsive MAPK cascade regulates metabolic flow to antimicrobial metabolite synthesis.
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Kumar,K., Rao,K.P., Sharma,P. and Sinha,A.K.
Plant Physiol. Biochem. 2008 46(10) 891-897
Differential regulation of rice mitogen activated protein kinase kinase (MKK) by abiotic stress
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Louis-Philippe Hamel, Marie-Claude Nicole, Somrudee Sritubtim,Marie-Jose´e Morency, Margaret Ellis, Juergen Ehlting,Nathalie Beaudoin Brad Barbazuk, Dan Klessig, Justin Lee,Greg Martin, John Mundy, Yuko Ohashi, Dierk Scheel, Jen Sheen,Tim Xing, Shuqun Zhang, Armand Seguin and Brian E. Ellis
Trends Plant Sci. 2006 11 192-8
Ancient signals: comparative genomics of plant MAPK and MAPKK gene families
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TextPresso Search
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Search textpresso for SMG1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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オントロジー
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Gene Ontology
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response to wounding( GO:0009611 )
defense response to fungus( GO:0050832 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
root development( GO:0048364 )
cell proliferation( GO:0008283 )
response to brassinosteroid stimulus( GO:0009741 )
defense response to bacterium( GO:0042742 )
response to salicylic acid stimulus( GO:0009751 )
MAPKKK cascade( GO:0000165 )
response to abscisic acid stimulus( GO:0009737 )
response to chitin( GO:0010200 )
inflorescence development( GO:0010229 )
defense response to insect( GO:0002213 )
response to herbivore( GO:0080027 )
response to carbohydrate stimulus( GO:0009743 )
response to cold( GO:0009409 )
brassinosteroid mediated signaling( GO:0009742 )
cytokinin metabolic process( GO:0009690 )
regulation of cell differentiation( GO:0045595 )
regulation of cell proliferation( GO:0042127 )
response to salt stress( GO:0009651 )
nucleus( GO:0005634 )
membrane( GO:0016020 )
cytoplasm( GO:0005737 )
abscisic acid mediated signaling( GO:0009738 )
response to osmotic stress( GO:0006970 )
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Trait Ontology
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relative plant height( TO:0001034 )
relative root length( TO:0000516 )
osmotic response sensitivity( TO:0000095 )
grain weight( TO:0000590 )
1000-seed weight( TO:0000382 )
secondary branch number( TO:0000557 )
primary branch number( TO:0000547 )
seed set percent( TO:0000455 )
panicle axis angle( TO:0000342 )
salt tolerance( TO:0006001 )
seed size( TO:0000391 )
leaf angle( TO:0000206 )
grain number( TO:0002759 )
spikelet number( TO:0000456 )
cytokinin content( TO:0002660 )
cold tolerance( TO:0000303 )
filled grain number( TO:0000447 )
inflorescence development trait( TO:0000621 )
stem borer resistance( TO:0000454 )
brassinosteroid sensitivity( TO:0002677 )
panicle length( TO:0000040 )
abscisic acid sensitivity( TO:0000615 )
diterpenoid phytoalexin content( TO:0002669 )
bacterial blight disease resistance( TO:0000175 )
grain length( TO:0000734 )
plant height( TO:0000207 )
grain yield( TO:0000396 )
grain size( TO:0000397 )
fungal disease resistance( TO:0000439 )
root development trait( TO:0000656 )
cytokinin sensitivity( TO:0000167 )
auxin sensitivity( TO:0000163 )
UV light sensitivity( TO:0000160 )
blast disease( TO:0000074 )
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Plant Ontology
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root development stage( PO:0007520 )
inflorescence development stage( PO:0001083 )
leaf sheath( PO:0020104 )
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関連系統
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形質画像
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更新日
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2023-12-21 11:09:04.195
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更新情報
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