更新情報遺伝子 - 詳細
詳細 - 遺伝子
フィードバックはこちら| Basic Information | |
|---|---|
| CGSNL 遺伝子シンボル | HOX13 |
| 遺伝子シンボルシノニム | Oshox13, OsHox13, OsHDZ11, OsHDZIP11, HDZ11, HDZIP11 |
| CGSNL 遺伝子名 | HOMEOBOX GENE 13 |
| 遺伝子名シノニム | rice homeobox gene 13, Homeobox-leucine zipper protein HOX13, Homeodomain transcription factor HOX13, HD-ZIP protein HOX13, homeodomain-leucine zipper transcription factor 11, OsHDZIP transcription factor 11 |
| タンパク質名 | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX13 |
| 対立遺伝子 | |
| 染色体番号 | 3 |
| 解説 | EF555534. A2XDD6(indica), Q10QP3(japonica). PO:0030123: panicle inflorescence. GO:1901698: response to nitrogen compound. |
| 形質クラス |
耐性、抵抗性 - ストレス耐性
その他 |
| 発現 | |
| Sequence/Locus | |
| cDNA Accession No. |
AK105644
|
| MSU ID |
LOC_Os03g08960.1
|
| RAP ID |
Os03g0188900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| マップ | |
| 位置情報(cM) | |
| リンケージマップ | Classical linkage map |
| 文献 | |
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Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022 9(8) The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
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Shanks C.M., Huang J., Cheng C.Y., Shih H.S., Brooks M.D., Alvarez J.M., Araus V., Swift J., Henry A., Coruzzi G.M.
Front Plant Sci 2022 13 1006044 Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice.
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Mohanty B.
Front Genet 2021 12 639654 Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
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| TextPresso Search | Search textpresso for HOX13 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| オントロジー | |
| Gene Ontology |
nitrogen utilization( GO:0019740 )
response to water deprivation( GO:0009414 ) response to jasmonic acid stimulus( GO:0009753 ) response to salt stress( GO:0009651 ) transcription( GO:0006350 ) regulation of transcription, DNA-dependent( GO:0006355 ) response to deep water( GO:0030912 ) plastid( GO:0009536 ) nucleus( GO:0005634 ) sequence-specific DNA binding( GO:0043565 ) transcription factor activity( GO:0003700 ) |
| Trait Ontology |
submergence tolerance( TO:0000524 )
salt tolerance( TO:0006001 ) jasmonic acid sensitivity( TO:0000172 ) drought tolerance( TO:0000276 ) nitrogen sensitivity( TO:0000011 ) relative yield( TO:0000153 ) |
| Plant Ontology |
root( PO:0009005 )
stem( PO:0009047 ) leaf( PO:0025034 ) inflorescence( PO:0009049 ) carpel( PO:0009030 ) plant embryo( PO:0009009 ) |
| 関連系統 | |
| - | |
| 形質画像 | |
| - | |
| 更新日 | |
| 2023-06-26 14:39:39.685 | |
