遺伝子 - 詳細
詳細 - 遺伝子
Basic Information | |
---|---|
CGSNL 遺伝子シンボル | HOX12 |
遺伝子シンボルシノニム | Oshox12, OsHox12 |
CGSNL 遺伝子名 | HOMEOBOX GENE 12 |
遺伝子名シノニム | rice homeobox gene 12, Homeobox-leucine zipper protein HOX12, Homeodomain transcription factor HOX12, HD-ZIP protein HOX12 |
タンパク質名 | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX12 |
対立遺伝子 | |
染色体番号 | 3 |
解説 | EF555533. A2XDK5(indica), Q10QF2(japonica). GO:0099402: plant organ development. |
形質クラス |
生殖器官 - 穂
耐性、抵抗性 - ストレス耐性 QTLの特性 - 発芽 その他 |
発現 | |
Sequence/Locus | |
cDNA Accession No. |
AK073446
|
MSU ID |
LOC_Os03g10210.1
|
RAP ID |
Os03g0198600 |
Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
INSD Accession List (Test version) |
- |
マップ | |
位置情報(cM) | |
リンケージマップ | Classical linkage map |
文献 | |
Naithani S., Mohanty B., Elser J., D'Eustachio P., Jaiswal P.
Plants (Basel) 2023 12(11) Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (<i>Oryza sativa</i>).
|
|
Mohanty B.
Front Genet 2021 12 639654 Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
|
|
Gao S., Fang J., Xu F., Wang W., Chu C.
Plant Cell 2016 28(3) 680-95 Rice HOX12 Regulates panicle exsertion by Directly Modulating the Expression of ELONGATED UPPERMOST INTERNODE1.
|
|
Agalou,A., Purwantomo,S., Overnas,E., Johannesson,H., Zhu,X., Estiati,A., de Kam,R.J., Engstrom,P., Slamet-Loedin,I.H., Zhu,Z., Wang,M., Xiong,L., Meijer,A.H. and Ouwerkerk,P.B.
Plant Mol. Biol. 2008 66(1-2) 87-103 A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members
|
|
TextPresso Search | Search textpresso for HOX12 ( Recent references may be retrievable, but without any warranty ) |
DB Reference | |
Gramene ID | - |
オントロジー | |
Gene Ontology |
response to flooding( GO:0009413 )
seed germination( GO:0009845 ) response to deep water( GO:0030912 ) sequence-specific DNA binding( GO:0043565 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) transcription( GO:0006350 ) regulation of transcription, DNA-dependent( GO:0006355 ) gibberellin metabolic process( GO:0009685 ) gibberellic acid homeostasis( GO:0010336 ) |
Trait Ontology |
gibberellic acid content( TO:0002675 )
inflorescence exsertion( TO:0001002 ) submergence tolerance( TO:0000524 ) |
Plant Ontology |
inflorescence( PO:0009049 )
0 seed germination stage( PO:0007057 ) coleoptile emergence stage( PO:0007045 ) |
関連系統 | |
- | |
形質画像 | |
- | |
更新日 | |
2023-10-11 13:50:34.73 |