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Basic Information
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CGSNL 遺伝子シンボル
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AGO1D
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遺伝子シンボルシノニム
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OsAGO1d, AGO1d
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CGSNL 遺伝子名
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ARGONAUTE 1D
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遺伝子名シノニム
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Protein argonaute 1D
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タンパク質名
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PROTEIN ARGONAUTE 1D
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対立遺伝子
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osago1d- 1, osago1d-2, osago1d-3
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染色体番号
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6
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解説
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Q5Z5B2. an OsMIR168a's target gene.
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形質クラス
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生殖器官 - 受粉、受精、稔性 - 雄性不稔
耐性、抵抗性 - ストレス耐性
その他
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発現
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Sequence/Locus
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cDNA Accession No.
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AK122176
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MSU ID
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LOC_Os06g51310.1
LOC_Os06g51310.2
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RAP ID
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Os06g0729300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Si F., Luo H., Yang C., Gong J., Yan B., Liu C., Song X., Cao X.
Sci China Life Sci 2022
Mobile ARGONAUTE 1d binds 22-nt miRNAs to generate phasiRNAs important for low-temperature male fertility in rice.
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Liu C., Li N., Lu Z., Sun Q., Pang X., Xiang X., Deng C., Xiong Z., Shu K., Yang F., Hu Z.
Front Plant Sci 2022 13 839457
CG and CHG Methylation Contribute to the Transcriptional Control of OsPRR37-output Genes in Rice.
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Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022 20(2) 310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
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Araki S., Le N.T., Koizumi K., Villar-Briones A., Nonomura K.I., Endo M., Inoue H., Saze H., Komiya R.
Nat Commun 2020 11(1) 3115
miR2118-dependent U-rich phasiRNA production in rice anther wall development.
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Fei Q., Yang L., Liang W., Zhang D., Meyers B.C.
J. Exp. Bot. 2016 67(21) 6037-6049
Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways.
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Wu J., Yang Z., Wang Y., Zheng L., Ye R., Ji Y., Zhao S., Ji S., Liu R., Xu L., Zheng H., Zhou Y., Zhang X., Cao X., Xie L., Wu Z., Qi Y., Li Y.
Elife 2015 4
Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA.
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Yang Y., Zhong J., Ouyang Y.D., Yao J.
Gene 2013 528(2) 221-35
The integrative expression and co-expression analysis of the AGO gene family in rice.
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Wu L,Zhang Q,Zhou H,Ni F,Wu X,Qi Y
Plant Cell 2009 21(11) 3421-35
Rice MicroRNA effector complexes and targets.
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Kapoor M, Arora R, Lama T, Nijhawan A, Khurana JP, Tyagi AK, Kapoor S.
BMC Genomics. 2008 9 451
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
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TextPresso Search
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Search textpresso for AGO1D
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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regulation of programmed cell death( GO:0043067 )
RNA binding( GO:0003723 )
response to cold( GO:0009409 )
anther development( GO:0048653 )
nucleic acid binding( GO:0003676 )
mitochondrion( GO:0005739 )
gene silencing by RNA( GO:0031047 )
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Trait Ontology
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genic male sterility-thermo sensitive( TO:0000067 )
male sterility( TO:0000437 )
cold tolerance( TO:0000303 )
pollen fertility( TO:0000421 )
stamen length( TO:0002609 )
stamen size( TO:0002601 )
stamen anatomy and morphology trait( TO:0000215 )
anther shape( TO:0000214 )
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Plant Ontology
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anther( PO:0009066 )
anther wall( PO:0000002 )
anther development stage( PO:0001004 )
E anther wall tapetum degeneration initiated stage( PO:0001032 )
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関連系統
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形質画像
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更新日
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2023-03-13 10:44:14.383
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更新情報
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