|
Basic Information
|
|
CGSNL 遺伝子シンボル
|
YUCCA1
|
|
遺伝子シンボルシノニム
|
OsYUCCA1, OsYUC1, YUC1
|
|
CGSNL 遺伝子名
|
YUCCA-LIKE GENE 1
|
|
遺伝子名シノニム
|
(YUCCA-like gene)
|
|
タンパク質名
|
|
|
対立遺伝子
|
|
|
染色体番号
|
1
|
|
解説
|
an orthologue of AtYUCCA. TO:0001041: root yield. GO:1990110: callus formation.
|
|
形質クラス
|
生化学的性質
栄養器官 - 根
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性
|
|
発現
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK105488
|
|
MSU ID
|
LOC_Os01g45760.1
LOC_Os01g45760.2
|
|
RAP ID
|
Os01g0645400
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
マップ
|
|
位置情報(cM)
|
|
|
リンケージマップ
|
Classical linkage map
|
|
文献
|
|
Wang S., Han S., Zhou X., Zhao C., Guo L., Zhang J., Liu F., Huo Q., Zhao W., Guo Z., Chen X.
Plant Cell 2023 35(6) 2391-2412
Phosphorylation and ubiquitination of OsWRKY31 are integral to OsMKK10-2-mediated defense responses in rice.
|
|
Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023 6(1) 457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
|
|
Kellogg E.A.
Plant Cell 2022 34(7) 2518-2533
Genetic control of branching patterns in grass inflorescences.
|
|
Zhang T., You J., Zhang Y., Yao W., Chen W., Duan Q., Xiao W., Ye L., Zhou Y., Sang X., Ling Y., He G., Li Y.
New Phytol. 2021
lf1 regulates the lateral organs polarity development in rice.
|
|
Da Costa MVJ., Ramegowda V., Sreeman S., Nataraja K.N.
Int J Mol Sci 2021 22(21)
Targeted Phytohormone Profiling Identifies Potential Regulators of spikelet sterility in Rice under Combined Drought and Heat Stress.
|
|
Chang S., Chen Y., Jia S., Li Y., Liu K., Lin Z., Wang H., Chu Z., Liu J., Xi C., Zhao H., Han S., Wang Y.
PLoS Genet. 2020 16(10) e1009157
Auxin apical dominance governed by the OsAsp1-OsTIF1 complex determines distinctive rice caryopses development on different branches.
|
|
Piacentini D., Della Rovere F., Sofo A., Fattorini L., Falasca G., Altamura M.M.
Front Plant Sci 2020 11 1182
Nitric Oxide Cooperates With Auxin to Mitigate the Alterations in the root system Caused by Cadmium and Arsenic.
|
|
Hu Y., Li S., Fan X., Song S., Zhou X., Weng X., Xiao J., Li X., Xiong L., You A., Xing Y.
Plant Physiol. 2020 184(3) 1424-1437
<i>OsHOX1</i> and <i>OsHOX28</i> Redundantly Shape Rice tiller angle by Reducing <i>HSFA2D</i> Expression and Auxin Content.
|
|
Tripathi D.K., Rai P., Guerriero G., Sharma S., Corpas F.J., Singh V.P.
J. Exp. Bot. 2020
Silicon induces adventitious root formation in rice (Oryza sativa L.) under arsenate stress with the involvement of nitric oxide and indole-3-acetic acid.
|
|
Guo T., Chen K., Dong N.Q., Ye W.W., Shan J.X., Lin H.X.
J Integr Plant Biol 2019
Tillering and small grain 1 dominates the tryptophan aminotransferase family required for local auxin biosynthesis in rice.
|
|
Zhang H., Tan X., Li L., He Y., Hong G., Li J., Lin L., Cheng Y., Yan F., Chen J., Sun Z.
Mol. Plant Pathol. 2019 20(8) 1093-1104
Suppression of auxin signalling promotes rice susceptibility to Rice black streaked dwarf virus infection.
|
|
Yang C., Liu X., Li D., Zhu X., Wei Z., Feng Z., Zhang L., He J., Mou C., Jiang L., Wan J.
Plant Sci. 2019 288 110239
OsLUGL is involved in the regulating auxin level and OsARFs expression in rice (Oryza sativa L.).
|
|
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019 12(1) 92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
|
|
Zeng Y., Wen J., Zhao W., Wang Q., Huang W.
Front Plant Sci 2019 10 1663
Rational Improvement of Rice Yield and cold tolerance by Editing the Three Genes <i>OsPIN5b</i>, <i>GS3</i>, and <i>OsMYB30</i> With the CRISPR-Cas9 System.
|
|
Tong X., Wang Y., Sun A., Bello B.K., Ni S., Zhang J.
Int J Mol Sci 2018 19(12)
<b>Notched Belly Grain 4, a Novel Allele of Dwarf 11, Regulates grain shape and Seed Germination in Rice (Oryza sativa L.)</b>.
|
|
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018 8(9) 383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
|
|
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
|
|
Wang T., Li C., Wu Z., Jia Y., Wang H., Sun S., Mao C., Wang X.
Front Plant Sci 2017 8 1121
Abscisic Acid Regulates Auxin Homeostasis in Rice Root Tips to Promote root hair Elongation.
|
|
Xu Y., Zong W., Hou X., Yao J., Liu H., Li X., Zhao Y., Xiong L.
Plant J. 2015 83(5) 806-17
OsARID3, an AT-rich Interaction Domain-containing protein, is required for shoot meristem development in rice.
|
|
Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014 61 608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
|
|
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014 172(5) 2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
|
|
Yi J., Liu L., Cao Y., Li J., Mei M.
J. Genet. 2013 92(3) 471-80
Cloning, characterization and expression of OsFMO(t) in rice encoding a flavin monooxygenase.
|
|
Sazuka T,Kamiya N,Nishimura T,Ohmae K,Sato Y,Imamura K,Nagato Y,Koshiba T,Nagamura Y,Ashikari M,Kitano H,Matsuoka M
Plant J. 2009 60(2) 227-41
A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos.
|
|
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008 279(5) 499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
|
|
Hirano K., Aya K., Hobo T., Sakakibara H., Kojima M., Rosalyn Angeles Shim, Hasegawa Y., Miyako Ueguchi-Tanaka, Matsuoka M.
Plant & cell physiology 2008 49(10) 1429-50
Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.
|
|
Yamamoto Y, Kamiya N, Morinaka Y, Matsuoka M, Sazuka T.
Plant Physiol. 2007 143(3) 1362-1371
Auxin Biosynthesis by the YUCCA Genes in Rice.
|
|
TextPresso Search
|
Search textpresso for YUCCA1
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
オントロジー
|
|
Gene Ontology
|
response to heat( GO:0009408 )
response to water deprivation( GO:0009414 )
adventitious root development( GO:0048830 )
response to cadmium ion( GO:0046686 )
response to arsenic( GO:0046685 )
defense response to virus( GO:0051607 )
response to anoxia( GO:0034059 )
response to abscisic acid stimulus( GO:0009737 )
flavin-containing monooxygenase activity( GO:0004499 )
auxin biosynthetic process( GO:0009851 )
|
|
Trait Ontology
|
black streak dwarf virus resistance( TO:0000020 )
abscisic acid sensitivity( TO:0000615 )
silicon sensitivity( TO:0000031 )
root number( TO:0000084 )
adventitious root number( TO:0001006 )
root fresh weight( TO:0000578 )
drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
auxin content( TO:0002672 )
callus induction( TO:0000428 )
|
|
Plant Ontology
|
flag leaf( PO:0020103 )
inflorescence branch meristem( PO:0009105 )
|
|
関連系統
|
|
-
|
|
形質画像
|
|
-
|
|
更新日
|
|
2023-10-05 10:03:35.964
|
更新情報
フィードバックはこちら